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Assignments for Computational Biology Fall 2021 at the University of Pittsburgh
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msaConvert #78

Open els199 opened 3 years ago

els199 commented 3 years ago

https://github.com/brouwern/compbio2021/blob/4fc22d26cd66119a177fd9572bd409ffa989216d/KEY-MSA-walkthrough-shroom.Rmd#L652

what does msaConvert convert the shrooms_align_seqinr to? Is it aligning it?

brouwern commented 3 years ago

this is an intermediate step that sets it up for the next step. ideally the writers of msa would revise the code to make this step unnecessary

On Tue, Oct 5, 2021 at 11:17 AM els199 @.***> wrote:

https://github.com/brouwern/compbio2021/blob/4fc22d26cd66119a177fd9572bd409ffa989216d/KEY-MSA-walkthrough-shroom.Rmd#L652

what does msaConvert convert the shrooms_align_seqinr to? Is it aligning it?

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University of Pittsburgh

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National Aviary, Dept. of Conservation & Field Research https://www.aviary.org/conservation

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