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bschiffthaler / seidr

Toolkit to create crowd networks
GNU General Public License v3.0
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Incomplete stderr log when running el-ensemble in targeted mode #11

Closed nicolasDelhomme closed 4 years ago

nicolasDelhomme commented 5 years ago

This is a minor issue. In the stderr log from el-ensemble (when run using the -t option on batch of 1000 genes), not all genes are reported as being "started". See below, quite a few do not reach 1000 (the last batch: 27000 - has 95, so that's OK). The results are however complete and all genes are present. Hence I just report that in case others would wonder. It may otherwise occur too, but I have not tested that.

./el-ensemble-21000.err 998 ./el-ensemble-5000.err 999 ./el-ensemble-26000.err 994 ./el-ensemble-19000.err 1000 ./el-ensemble-8000.err 994 ./el-ensemble-20000.err 1000 ./el-ensemble-15000.err 1000 ./el-ensemble-27000.err 95 ./el-ensemble-17000.err 1000 ./el-ensemble-13000.err 1000 ./el-ensemble-23000.err 1000 ./el-ensemble-10000.err 1000 ./el-ensemble-25000.err 980 ./el-ensemble-11000.err 979 ./el-ensemble-3000.err 994 ./el-ensemble-6000.err 1000 ./el-ensemble-18000.err 1000 ./el-ensemble-0.err 980 ./el-ensemble-2000.err 1000 ./el-ensemble-9000.err 980 ./el-ensemble-16000.err 995 ./el-ensemble-1000.err 997 ./el-ensemble-24000.err 1000 ./el-ensemble-7000.err 980 ./el-ensemble-22000.err 980 ./el-ensemble-4000.err 1000 ./el-ensemble-12000.err 980 ./el-ensemble-14000.err 1000

bschiffthaler commented 4 years ago

The new progress bar probably makes this issue moot (although I am pretty sure it was fine in recent builds) so I'm closing for now.