seidr neighbours - allow for lower/uppercase mismatch

bschiffthaler / seidr

Toolkit to create crowd networks

GNU General Public License v3.0

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seidr neighbours - allow for lower/uppercase mismatch #15

Closed nicolasDelhomme closed 4 years ago

nicolasDelhomme commented 5 years ago

When running:

seidr neighbours -g AT1G01070,At4g01430,AT4G28040 ...

seidr reports:

[ ERROR ][ 2019-09-02T12:31:20 ][ seidr ]: Gene At4g01430 not found in header.

Maybe allowing for lower/uppercase mismatches in the gene ID search could be useful (and possibly issue a warning, even if I can't think of any organism that have case sensitive gene IDs.)

bschiffthaler commented 4 years ago

Now do-able with seidr neighbours --case-insensitive or seidr neighbours -I