Rework vala.nf with new task scheduler

bschiffthaler / seidr

Toolkit to create crowd networks

GNU General Public License v3.0

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Rework vala.nf with new task scheduler #4

Closed bschiffthaler closed 3 years ago

bschiffthaler commented 5 years ago

Vala currently submits jobs based on 1 MPI thread == 1 worker thread, but seidr now uses OpenMP + MPI hybrid parallelism, therefore it is inefficient to run vala as is.

bschiffthaler commented 3 years ago

@loalon You reworked the Nextflow scheduler, didn't you? What's the state of it? We can merge and close the issue if you think it's ready

bschiffthaler commented 3 years ago

Fixed by adc48d6f. Thanks @loalon !