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bsmith89
/
StrainFacts
Factorize metagenotypes to infer strains and their abundances
MIT License
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Questions about TSV input format
#15
Nautilus96
opened
3 months ago
3
Subsampling sites and other considerations for faster fitting
#14
elsherbini
closed
5 months ago
4
Interpreting the genotype output
#13
ajverster
closed
5 months ago
1
Prevalence filtering question
#12
gavinmdouglas
closed
9 months ago
2
Running model evaluations for non simulation data
#11
elximo
opened
1 year ago
2
Added conda env yaml, github ci, and devcontainer
#10
nick-youngblut
closed
1 year ago
3
bioconda recipe or pypi release?
#9
nick-youngblut
closed
1 year ago
4
New Feature: Short-circuit before model fitting when data has just one position or just one sample.
#8
bsmith89
closed
9 months ago
1
Failed positive_counts constraint when loading metagenotype data from TSV with missing values.
#7
elximo
closed
1 year ago
5
Refine import/export TSV formats
#6
bsmith89
opened
1 year ago
0
Improve documentation of input formats
#5
SilasK
opened
1 year ago
6
Use Genotypes generated in a discovery set to deconvolute new metagenomes
#4
sergioSEa
opened
1 year ago
1
How to perform model selection?
#3
gavinmdouglas
closed
2 years ago
4
Improper error handling when num strains == 1
#2
gavinmdouglas
closed
2 years ago
2
Pytorch package not found
#1
gavinmdouglas
closed
2 years ago
2