bst-mug n2c2 issues - Githubissues

bst-mug / n2c2

Support code for participation at the 2018 n2c2 Shared-Task Track 1

https://n2c2.dbmi.hms.harvard.edu

Apache License 2.0

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Bump log4j-core from 2.8.1 to 2.17.1

#139 dependabot[bot] opened 1 year ago
0
data prep code

#138 bhomass closed 2 years ago
1
Bump log4j-core from 2.8.1 to 2.16.0

#137 dependabot[bot] closed 1 year ago
1
Bump log4j-api from 2.8.1 to 2.16.0

#136 dependabot[bot] opened 2 years ago
0
Bump commons-io from 2.6 to 2.7

#135 dependabot[bot] opened 3 years ago
1
Cleanup pom.xml

#134 michelole opened 3 years ago
1
Bump junit from 4.12 to 4.13.1

#133 dependabot[bot] opened 3 years ago
1
Bump log4j-core from 2.8.1 to 2.13.2

#132 dependabot[bot] closed 2 years ago
2
Remove guava dependency

#131 michelole closed 4 years ago
1
Support for McNemar's Test

#130 michelole closed 4 years ago
1
Determinism

#129 michelole opened 4 years ago
0
Fix style issues

#128 michelole closed 4 years ago
1
Issue 126

#127 michelole closed 5 years ago
1
Self-trained embeddings with window size 20

#126 michelole closed 5 years ago
0
Implement `Comparable` for Patient

#125 michelole closed 5 years ago
1
Issue 116

#124 michelole closed 5 years ago
1
Issue 114

#123 michelole closed 5 years ago
1
Restart training from last epoch

#122 michelole opened 5 years ago
0
Issue 113

#121 michelole closed 5 years ago
1
Refactor the code and add tests for cleaning

#120 michelole closed 5 years ago
1
Switch `TokenIterator` to use our tokenization method (fixes #86)

#119 michelole closed 5 years ago
1
Get new LSTM results

#118 michelole closed 5 years ago
2
DRY classifier runners (fixes #106)

#117 michelole closed 5 years ago
1
DRY Classifier factories

#116 michelole closed 5 years ago
0
Consider smaller hidden layer size

#115 michelole closed 5 years ago
1
Number of epochs

#114 michelole closed 5 years ago
0
Self-trained fasttext embeddings

#113 michelole closed 5 years ago
2
Investigate freezing embeddings layer

#112 michelole closed 5 years ago
2
Refactor NN code

#111 michelole closed 5 years ago
1
LSTM with character trigrams

#110 michelole opened 5 years ago
1
Issue 82

#109 michelole closed 5 years ago
1
Issue 103

#108 michelole closed 5 years ago
1
BLSTM + BioWordVec

#107 michelole opened 5 years ago
2
DRY Runners

#106 michelole closed 5 years ago
0
DRY Cleaning

#105 michelole opened 5 years ago
1
Cleanup code

#104 michelole closed 5 years ago
1
fasttext baseline

#103 michelole closed 5 years ago
0
[NN] Dropout

#102 michelole closed 4 years ago
0
Plot test stats over number of epochs

#101 michelole closed 5 years ago
1
Introduce a saliency analyzer for NN (fixes #88)

#100 michelole closed 5 years ago
1
Reduce `lstmLayerSize`

#99 michelole closed 5 years ago
3
`NGramIterator` should receive `truncateReviewsToLength` as parameter

#98 michelole closed 5 years ago
1
Document as average of its word vectors

#97 michelole closed 5 years ago
1
Prediction cache

#96 michelole opened 5 years ago
0
Make `predict` a public method that return raw probabilities (fixes #90)

#95 michelole closed 5 years ago
1
Pull up methods overridden from `DataSetIterator` (fixes #85)

#94 michelole closed 5 years ago
1
Save models at each epoch (fixes #87)

#93 michelole closed 5 years ago
1
Input representation as its own class

#92 michelole closed 5 years ago
1
Pull up `fillBinaryMultiHotVector` (fixes #85)

#91 michelole closed 5 years ago
1
[NN] Expose prediction probabilities

#90 michelole closed 5 years ago
0