bst-mug trec-2017-precision-medicine issues

bst-mug / trec-2017-precision-medicine

imi_mug support code and resources from our participation at the TREC 2017 Precision Medicine Track

https://trec.nist.gov/pubs/trec26/trec2017.html

MIT License

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issues

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Merge pull request #9 from bst-mug/master

#156 plopezgarcia closed 6 years ago
0
Merge to sync repositories

#155 plopezgarcia closed 6 years ago
0
Update R script to support final results (with topic 12)

#154 michelole closed 6 years ago
0
Save trec_eval output to a file

#153 michelole opened 7 years ago
0
Chemotherapy is misspelled in the keyword boosting candidate list

#152 michelole opened 7 years ago
0
Support Lexigram API key as environment variable

#151 michelole opened 7 years ago
0
Fixing tests

#150 michelole closed 7 years ago
2
Organize templates into subfolders

#149 michelole closed 6 years ago
1
Java 9 support + bugfixes

#148 michelole closed 7 years ago
0
Support code for submission

#147 michelole closed 7 years ago
0
Set run names automatically

#146 michelole opened 7 years ago
0
Sort result files

#145 michelole closed 6 years ago
1
Adds list of generic synonyms to version control

#144 michelole closed 7 years ago
0
Updates templates to add missing "surgery" keyword

#143 michelole closed 7 years ago
0
Negative keyword boosting

#142 michelole closed 7 years ago
0
More Clinical Trial experiments

#141 michelole closed 7 years ago
0
Remove cancer-related words and adds them back as synonyms

#140 michelole closed 7 years ago
0
Clinical Trial experiments

#139 michelole closed 7 years ago
0
General improvements

#138 michelole closed 7 years ago
0
New experiments

#137 michelole closed 7 years ago
0
[Experiment] Simplified template

#136 michelole opened 7 years ago
0
Generic synonyms

#135 michelole closed 7 years ago
0
[Experiment] Optimal boost for title

#134 michelole opened 7 years ago
0
Gene expansion as synonym list

#133 michelole closed 7 years ago
0
Fixes broken test

#132 michelole closed 7 years ago
0
General improvements

#131 michelole closed 7 years ago
0
Downweight terms

#130 michelole closed 7 years ago
0
More experiments and bugfixes

#129 michelole closed 7 years ago
0
Fixes broken live test by enforcing a default type

#128 michelole closed 7 years ago
0
Preparing for submission

#127 michelole closed 7 years ago
0
Adds keywords from Google Sheets

#126 michelole closed 7 years ago
0
Issue 81

#125 michelole closed 7 years ago
0
[WordRemovalQueryDecorator] Accept words to remove via parameter

#124 michelole opened 7 years ago
0
Bugfixes and overall improvements

#123 michelole closed 7 years ago
0
Plot number of relevant documents retrieved

#122 michelole opened 7 years ago
0
[Experiment] Down-weight common oncogenes

#121 michelole opened 7 years ago
0
Adds "amplification" to the list of domain stopwords

#120 michelole closed 7 years ago
0
Fixes duplicate doc

#119 michelole closed 7 years ago
0
Updates gold standard with most recent Google Sheets snapshot

#118 michelole closed 7 years ago
0
Gold standard of topic 2 should be a superset of topic 12

#117 michelole opened 7 years ago
1
[Experiment] Remove "amplification" from gene

#116 michelole closed 7 years ago
1
Relax criteria

#115 michelole closed 7 years ago
2
Bugfixes and general improvements

#114 michelole closed 7 years ago
0
[Indexing] Do not evaluate DTD

#113 michelole closed 7 years ago
0
Bugfixes and overall improvements

#112 michelole closed 7 years ago
0
Recreate index before submitting results

#111 michelole closed 7 years ago
1
Adds 'publicationYear' as a separate field (refs #74)

#110 michelole closed 7 years ago
0
Do not search into medline2017 collection

#109 michelole closed 7 years ago
0
Index and filter majorTopic meshTags

#108 michelole opened 7 years ago
0
Disease synonyms/hyponyms via synonym list

#107 michelole closed 7 years ago
7