fail to open the file“hvg-train-only.h5ad”in scrna-crossspecies

bunnech / cellot

Learning Single-Cell Perturbation Responses using Neural Optimal Transport

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fail to open the file“hvg-train-only.h5ad”in scrna-crossspecies #23

Closed suxiaoman666888 closed 4 months ago

suxiaoman666888 commented 4 months ago

when i try to use anndata to read the file“hvg-train-only.h5ad”in scrna-crossspecies,i failed. but i successfully read the file 4i-melanoma_cell_lines-8h.h5ad in cl-8h The error message is as follows AnnDataReadError: Above error raised while reading key '/layers' of type <class 'h5py._hl.group.Group'> from /.

I don't know why, looking forward to your reply，thanks.

bunnech commented 4 months ago

This might be due to the version of scanpy and anndata. Please check to use the latest version.