bunnech / cellot

Learning Single-Cell Perturbation Responses using Neural Optimal Transport
BSD 3-Clause "New" or "Revised" License
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Question about the groupby parameter? #27

Open weizhiting opened 3 months ago

weizhiting commented 3 months ago

Hi, In the lupuspatients dataset, you set the groupby parameter to condition. In the sciplex3 dataset, you set the groupby parameter to [cell_type, condition]?

(1) In the lupuspatients dataset, why not set the groupby parameter to [cell_type, condition] as 8 cell type exists. (2) Under what circumstances set the groupby parameter to condition, and set the groupby parameter to [cell_type, condition]?

Best.