burstein-lab / genomic-nlp-server

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Some typos / grammar #196

Closed guyshur closed 1 year ago

guyshur commented 1 year ago

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NOTICE: This process might take a few minutes 🤗

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The highlighted dot on the space marks hypo.clst.15503442. By zooming in to the cluster in which this dot resides we can interactively inspect the neighboring genes, most of which are related to the CRISPR-Cas system. For an in depth analysis, click on the dot to open a panel with the following information:

The predicted class is Prokaryotic Defense System and the prediction is reliable (trusted prediction is True). By clicking on GENE PREDICTIONS a panel will open showing all scores received by the model for the different classes. Here, the Prokaryotic Defense System prediction was unequivocal, with a score closed to 1 (possible scores are between 0 to 1).

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This strengthens the confidence that this protein is related to defense mechanisms, and more specifically to Subtype I in which Csc proteins are apparent.

note: distances were calculated on a high dimensional space, thus elements might not seem to be close in the 2D space map.

dudubur commented 1 year ago

@daniellemiller

daniellemiller commented 1 year ago

closed as completed by #922f5bd