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burtonrj / CytoPy

A data-centric flow/mass cytometry automated analysis framework
https://cytopy.readthedocs.io/en/latest/
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Numba issue in the CytoPy #38

Open ywu202300 opened 8 months ago

ywu202300 commented 8 months ago

I tried the conda installations step from website as well as docker image, I encounter the same numba error:

numba.core.errors.LoweringError: Failed in nopython mode pipeline (step: nopython mode backend) Storing i64 to ptr of i32 ('dim'). FE type int32

The command I run: singularity exec cytopy.sif python -c "from cytopy.data.gating_strategy import GatingStrategy, ThresholdGate, PolygonGate, EllipseGate"

The numba version in both place are 0.58.1 I believe.

Any idea on what's going on here? Thanks

ywu202300 commented 8 months ago

Is there a poetry lock file for this package? Thank you!