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buzsakilab / buzcode

Code for internal lab sharing - polishing has started but is by no means complete
http://www.buzsakilab.com/
GNU General Public License v3.0
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CellExplorer Integration #346

Closed dlevenstein closed 3 years ago

dlevenstein commented 4 years ago

CellExplorer should save a cellinfo.mat

brendonw1 commented 4 years ago

Does it read cell info.mats already? It should also do that

petersenpeter commented 4 years ago

This is already implemented. Brendon, I can give you a short introduction by skype if you want to.

dlevenstein commented 4 years ago

Peter - where do we get CellExplorer? Maybe you could put a link to it somewhere in buzcode? Do you intend that users will be able to contribute to it if we need to change things - add features or fix bugs?

brendonw1 commented 4 years ago

I found it on Peter's github: https://github.com/petersenpeter/Cell-Explorer

On Tue, Oct 29, 2019 at 12:03 PM Dan Levenstein notifications@github.com wrote:

Peter - where do we get CellExplorer? Maybe you could put a link to it somewhere in buzcode? Do you intend that users will be able to contribute to it if we need to change things - add features or fix bugs?

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petersenpeter commented 4 years ago

Yes it reads spikes.cellinfo.mat files together with event, manipulation. I started writing up a wiki for it: https://github.com/petersenpeter/Cell-Explorer/wiki

You are more than welcome to contribute.

I think we should dedicate some time for this at our next meeting.

Den tir. 29. okt. 2019 kl. 13.24 skrev Brendon Watson < notifications@github.com>:

I found it on Peter's github: https://github.com/petersenpeter/Cell-Explorer

On Tue, Oct 29, 2019 at 12:03 PM Dan Levenstein notifications@github.com wrote:

Peter - where do we get CellExplorer? Maybe you could put a link to it somewhere in buzcode? Do you intend that users will be able to contribute to it if we need to change things - add features or fix bugs?

— You are receiving this because you commented. Reply to this email directly, view it on GitHub < https://github.com/buzsakilab/buzcode/issues/346?email_source=notifications&email_token=AA26WTLBRHF5TYZ63YTXC7LQRBNEVA5CNFSM4JF42BD2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOECRCQMQ#issuecomment-547498034 , or unsubscribe < https://github.com/notifications/unsubscribe-auth/AA26WTL3QFCO6FAEXNEBGJDQRBNEVANCNFSM4JF42BDQ

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samamckenzie commented 4 years ago

@petersenpeter can you send me your manipulation struct, I can model mine around yours

petersenpeter commented 3 years ago

Closing the issue as it has been addressed https://cellexplorer.org/datastructure/standard-cell-metrics/