search

bvaldebenitom / SoloTE

GNU General Public License v3.0
23 stars 6 forks source link

Error with SoloTE_1.08 #21

Closed kimal999 closed 1 year ago

kimal999 commented 1 year ago

Had below error while running "SoloTE_1.08". 

Traceback (most recent call last):
  File "SoloTE_1.08/SoloTE_pipeline.py", line 321, in <module>
    marketmatrix_line3 = genenumber.stdout.split(" ")[0]+" "+barcodenumber.stdout.split(" ")[0]+" "+allcounts_number.stdout.split(" ")[0]
AttributeError: 'str' object has no attribute 'stdout'

I was able to run the program after changing line 321 to below.

marketmatrix_line3 = genenumber.split(" ")[0]+" "+barcodenumber.split(" ")[0]+" "+allcounts_number.split(" ")[0]

bvaldebenitom commented 1 year ago

Hi @kimal999,

thanks for reporting this. It is corrected in the upcoming version.

Best, Braulio.