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bvilhjal / ldpred

MIT License
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Format of score file #48

Closed privefl closed 5 years ago

privefl commented 5 years ago

This is the first 5 lines of the file I get using python LDpred.py score:

IID, true_phens, raw_effects_prs, pval_derived_effects_prs, sex
14, 1.000000e+00, -6.274195e+02, 1.954391e+00, 1, 
47, 0.000000e+00, -4.218925e+02, 1.958752e+00, 2, 
89, 0.000000e+00, -7.006771e+02, 2.584703e+00, 1, 
105, 0.000000e+00, -1.799069e+03, 6.776581e+00, 1,

Would it be possible to have just a comma (or tabulation) separator (without an extra space) and no separator at the end? It would be much easier to parse.

Thanks for your work updating LDpred.

bvilhjal commented 5 years ago

I believe I fixed this now.