No module named 'UserDict' when import bx.intervals.io

bxlab / bx-python

Tools for manipulating biological data, particularly multiple sequence alignments

MIT License

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Closed mikpom closed 5 years ago

mikpom commented 5 years ago

Getting ImportError: No module named 'UserDict' when running

from bx.intervals import io

I am using Python 3.5.2 and it looks like 2-to-3 migration issues. Does a workaround exist?

nsoranzo commented 5 years ago

bx-python does not use UserDict since v0.8.0, are you sure you are using the latest release? I cannot reproduce this issue.

mikpom commented 5 years ago

I was using old version. Fixed in 0.8.0. Closed.