cannot find config-metawrap file - something went wrong with the installation!

bxlab / metaWRAP

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

MIT License

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cannot find config-metawrap file - something went wrong with the installation! #539

Open B1991ing opened 6 months ago

B1991ing commented 6 months ago

Dear metawrap development team,

I ran metawrap binning, but error happened as below. Do you have any idea how to solve it ?

Error file diearrea_cecum_metawrap_binning.e.txt

Log file diearrea_cecum_metawrap_binning.o.txt

Best,

Bing

B1991ing commented 6 months ago

Both metawrap and config-metawrap are already under the same folder - /storage/public/apps/software/metawarp/metaWRAP-1.3/bin/, which is shown in the screenshot.

So, I don't know why it indicates such error info.

Best,

Bing

g-raymo commented 5 months ago

I resolved this issue by changing the name of the config-metawrap file located in /home/user/miniconda3/envs/metawrap-env/bin/config-metawrap file as it appears conda/mamba generates a new config-metawrap file and confuses the program. It appears metawrap prefers the config file located in the downloaded Git repository.