Improve annotator installation scripts

Improve fedora/centos/amazonlinux installation script
Improve debian/ubuntu installation script
Improve documentation
Add github actions to test installation in ubuntu and amazonlinux, our most common use cases

Mac installation script is removed for the time being; Docker is still available for that purpose. We can revisit in the future, this PR has gotten large enough, and we have Dist::Zilla (and Docker) based install to fall back to. In future work we will further simplify installation.

Summary by CodeRabbit

Release Notes

New Features
- Introduced a Docker image for a streamlined Perl development environment.
- Enhanced installation scripts with improved error handling and clearer user instructions.
- Updated Go package installations to newer versions, potentially introducing new features and bug fixes.
- Added a testing step to ensure Python code is validated before installation.
- Implemented automated workflows for building and testing Docker images for both Perl and Python applications.
Documentation
- Streamlined installation instructions for the Bystro software, emphasizing the Bystro Python package and Annotator.
- Provided detailed commands for installing dependencies and setting up the environment for the Bystro Annotator.
- Added comprehensive installation instructions for the Bystro Annotator, including Docker and local methods.
Bug Fixes
- Transitioned from DBD::mysql to DBD::MariaDB for improved database compatibility.
- Added new dependencies to enhance application functionality and performance.
Chores
- Updated version number to 2.0.0 to reflect significant changes in the software.
- Introduced a .dockerignore file to optimize Docker build context.

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Commits
Files that changed from the base of the PR and between 69f7fa17a348e8b7d6b6a185cf3dd8987c8a2a6a and 4a0f473cc20d7a9f690f996ffba28475f533a6d4.

Walkthrough

The pull request introduces a new Dockerfile.perl for creating a Docker image based on Ubuntu 24.04, specifically for installing Perl version 5.34.0. It also updates the Dockerfile.python to modify installation commands for Go packages, enhancing version management and testing. Additionally, new helper functions are added to improve file path management in test files, promoting code maintainability. The overall structure and functionality of the Perl and Python environments are refined through these changes.

Changes

Files	Change Summary
`Dockerfile.perl`	Created a Dockerfile for Ubuntu 24.04 to install Perl 5.34.0 with necessary dependencies and scripts.
`Dockerfile.python`	Updated installation commands for Go packages and added a testing step with `pytest`.
`python/python/bystro/covariance/tests/test_hypothesis_hd.py`	Added `get_pickle_file_path()` helper function to centralize file path retrieval in tests.
`.github/workflows/perl-build-docker.yml`	Added a GitHub Actions workflow for building and testing a Docker image for a Perl application.
`.github/workflows/python-build-docker.yml`	Added a GitHub Actions workflow for building and testing a Docker image for a Python application.
`perl/INSTALL.md`	Introduced installation instructions for the Bystro Annotator package, covering Docker and local methods.
`INSTALL.md`	Streamlined installation instructions for the Bystro software, focusing on clarity and accessibility.

Possibly related PRs

#553: This PR introduces new functions for statistical testing in the hypothesis_hd.py file, which may relate to the overall data processing and analysis capabilities that could be enhanced by the Perl environment set up in the main PR.
#565: This PR enhances the PRSJobData class with new attributes related to polygenic risk scores, which could be relevant if the Perl environment is used for similar genetic data processing tasks.

🐇 In a Docker world, we build with care,
Perl hops in, with dependencies to share.
Scripts now check, and INSTALL shines bright,
Hopping through installs, all feels just right!
With testing in place, our code's on the run,
A joyful leap, for all, it's fun! 🌟

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Pulled in this PR and tried to install through docker on workstation (Docker version 26.0.0, build 2ae903e) and got this error after some successful steps, full log below:

repos/bystro$ sudo docker build --tag bystro-cli . Got this from perl/README.md

[+] Building 32.0s (16/20) docker:default

 => [internal] load build definition from Dockerfile                                                                                                                0.1s
 => => transferring dockerfile: 844B                                                                                                                                0.0s
 => [internal] load metadata for docker.io/library/perl:5.36.1                                                                                                      0.7s
 => [internal] load .dockerignore                                                                                                                                   0.0s
 => => transferring context: 2B                                                                                                                                     0.0s
 => [ 1/16] FROM docker.io/library/perl:5.36.1@sha256:24dd0d17a61078a821a1994e48399a94d3678dfd3883cf7f3e5b70beafed65d3                                              8.6s
 => => resolve docker.io/library/perl:5.36.1@sha256:24dd0d17a61078a821a1994e48399a94d3678dfd3883cf7f3e5b70beafed65d3                                                0.0s
 => => sha256:24dd0d17a61078a821a1994e48399a94d3678dfd3883cf7f3e5b70beafed65d3 1.86kB / 1.86kB                                                                      0.0s
 => => sha256:4128d14ca5a20ef8bf3d9b56222041b7c2cff177a97d840ba9d855b998c146ba 1.79kB / 1.79kB                                                                      0.0s
 => => sha256:90e5e7d8b87a34877f61c2b86d053db1c4f440b9054cf49573e3be5d6a674a47 49.58MB / 49.58MB                                                                    0.9s
 => => sha256:27e1a8ca91d35598fbae8dee7f1c211f0f93cec529f6804a60e9301c53a604d0 24.05MB / 24.05MB                                                                    0.9s
 => => sha256:89ddd794b73a9f0ca3b9421040f7a3d44b49d366b640e895bd17efe54f69873b 6.10kB / 6.10kB                                                                      0.0s
 => => sha256:d3a767d1d12e57724b9f254794e359f3b04d4d5ad966006e5b5cda78cc382762 64.13MB / 64.13MB                                                                    1.7s
 => => extracting sha256:90e5e7d8b87a34877f61c2b86d053db1c4f440b9054cf49573e3be5d6a674a47                                                                           0.9s
 => => sha256:711be5dc50448ab08ccab0b44d65962f36574d341749ab30651b78ec0d4bfd1c 211.07MB / 211.07MB                                                                  5.0s
 => => sha256:5d3375a5345afe2b2bd450fe24461ee235b8528a7b48e376438d3db9ff4bcc76 167B / 167B                                                                          1.0s
 => => sha256:3ff53f89f94b568bb2dc6c4291e61e6d2427a16900090e68deee9f2c8705905f 15.24MB / 15.24MB                                                                    1.7s
 => => sha256:1604892853fa36a67f6f02bfde7d52437fe9fa95555bcb45ac5505cde0015256 164B / 164B                                                                          1.9s
 => => extracting sha256:27e1a8ca91d35598fbae8dee7f1c211f0f93cec529f6804a60e9301c53a604d0                                                                           0.2s
 => => extracting sha256:d3a767d1d12e57724b9f254794e359f3b04d4d5ad966006e5b5cda78cc382762                                                                           1.0s
 => => extracting sha256:711be5dc50448ab08ccab0b44d65962f36574d341749ab30651b78ec0d4bfd1c                                                                           2.6s
 => => extracting sha256:5d3375a5345afe2b2bd450fe24461ee235b8528a7b48e376438d3db9ff4bcc76                                                                           0.0s
 => => extracting sha256:3ff53f89f94b568bb2dc6c4291e61e6d2427a16900090e68deee9f2c8705905f                                                                           0.3s
 => => extracting sha256:1604892853fa36a67f6f02bfde7d52437fe9fa95555bcb45ac5505cde0015256                                                                           0.0s
 => [internal] load build context                                                                                                                                   1.7s
 => => transferring context: 731.58MB                                                                                                                               1.6s
 => [ 2/16] RUN cpanm --local-lib=/root/perl5 local::lib && eval $(perl -I /root/perl5/lib -Mlocal::lib)                                                            2.6s
 => [ 3/16] ADD ./ /root/bystro/                                                                                                                                    1.8s 
 => [ 4/16] RUN apt-get update && apt-get install sudo                                                                                                              3.1s 
 => [ 5/16] RUN git config --global url."https://".insteadOf git://                                                                                                 0.5s 
 => [ 6/16] WORKDIR /root/bystro                                                                                                                                    0.1s 
 => [ 7/16] RUN . install/install-lmdb-linux.sh                                                                                                                     4.4s 
 => [ 8/16] RUN wget https://dl.google.com/go/go1.13.6.linux-amd64.tar.gz     && tar -xf go1.13.6.linux-amd64.tar.gz     && mv go /usr/local                        7.1s 
 => [ 9/16] ADD . /bystro                                                                                                                                           1.9s 
 => [10/16] WORKDIR /bystro                                                                                                                                         0.1s 
 => [11/16] RUN git config --global url."https://".insteadOf git://                                                                                                 0.3s 
 => ERROR [12/16] RUN bash install/install-go-linux.sh                                                                                                              0.5s 
------                                                                                                                                                                   
 > [12/16] RUN bash install/install-go-linux.sh:                                                                                                                         
0.458 bash: install/install-go-linux.sh: No such file or directory
------
Dockerfile:22
--------------------
  20 |     
  21 |     RUN git config --global url."https://".insteadOf git://
  22 | >>> RUN bash install/install-go-linux.sh
  23 |     RUN bash install/install-go-packages.sh
  24 |     RUN bash install/install-lmdb-linux.sh
--------------------
ERROR: failed to solve: process "/bin/sh -c bash install/install-go-linux.sh" did not complete successfully: exit code: 127

After trying repos/bystro$ sudo docker build --tag bystro-cli . , I tried: repos/bystro$ sudo docker build --tag bystro-cli -f Dockerfile.python .

And it looked like it got really close to complete install, end of log below:

77.22 Downloading uc_micro_py-1.0.3-py3-none-any.whl (6.2 kB)
78.98 Building wheels for collected packages: bystro
78.98   Building wheel for bystro (pyproject.toml): started
87.78   Building wheel for bystro (pyproject.toml): finished with status 'error'
87.78   error: subprocess-exited-with-error
87.78   
87.78   × Building wheel for bystro (pyproject.toml) did not run successfully.
87.78   │ exit code: 1
87.78   ╰─> [60 lines of output]
87.78       Running `maturin pep517 build-wheel -i /usr/local/bin/python --compatibility off`
87.78       🍹 Building a mixed python/rust project
87.78       🔗 Found pyo3 bindings
87.78       🐍 Found CPython 3.11 at /usr/local/bin/python
87.78       📡 Using build options features from pyproject.toml
87.78          Compiling target-lexicon v0.12.14
87.78          Compiling once_cell v1.19.0
87.78          Compiling autocfg v1.1.0
87.78          Compiling proc-macro2 v1.0.79
87.78          Compiling libc v0.2.153
87.78          Compiling unicode-ident v1.0.12
87.78          Compiling parking_lot_core v0.9.9
87.78          Compiling cfg-if v1.0.0
87.78          Compiling smallvec v1.13.2
87.78          Compiling heck v0.4.1
87.78          Compiling scopeguard v1.2.0
87.78          Compiling portable-atomic v1.6.0
87.78          Compiling unindent v0.2.3
87.78          Compiling indoc v2.0.4
87.78          Compiling bystro v1.0.3 (/workspace/python)
87.78          Compiling lock_api v0.4.11
87.78          Compiling memoffset v0.9.0
87.78          Compiling quote v1.0.35
87.78          Compiling pyo3-build-config v0.21.2
87.78          Compiling syn v2.0.53
87.78          Compiling parking_lot v0.12.1
87.78          Compiling pyo3-ffi v0.21.2
87.78          Compiling pyo3 v0.21.2
87.78          Compiling pyo3-macros-backend v0.21.2
87.78          Compiling pyo3-macros v0.21.2
87.78       warning: unused import: `pyo3::types::PyDict`
87.78        --> src/lib.rs:2:5
87.78         |
87.78       2 | use pyo3::types::PyDict;
87.78         |     ^^^^^^^^^^^^^^^^^^^
87.78         |
87.78         = note: `#[warn(unused_imports)]` on by default
87.78       
87.78       warning: use of deprecated method `pyo3::deprecations::GilRefs::<T>::function_arg`: use `&Bound<'_, T>` instead for this function argument
87.78         --> src/lib.rs:16:31
87.78          |
87.78       16 | fn annotator(_py: Python<'_>, m: &PyModule) -> PyResult<()> {
87.78          |                               ^
87.78          |
87.78          = note: `#[warn(deprecated)]` on by default
87.78       
87.78       warning: use of deprecated method `pyo3::deprecations::GilRefs::<T>::function_arg`: use `&Bound<'_, T>` instead for this function argument
87.78         --> src/lib.rs:22:25
87.78          |
87.78       22 | fn _rs(_py: Python<'_>, m: &PyModule) -> PyResult<()> {
87.78          |                         ^
87.78       
87.78       warning: `bystro` (lib) generated 3 warnings (run `cargo fix --lib -p bystro` to apply 1 suggestion)
87.78           Finished `release` profile [optimized] target(s) in 5.16s
87.78       📦 Including files matching "bystro/**/**/*.so"
87.78       💥 maturin failed
87.78         Caused by: Failed to add the files to the wheel
87.78         Caused by: Failed to write to bystro/_rs.cpython-311-x86_64-linux-gnu.so
87.78         Caused by: File bystro/_rs.cpython-311-x86_64-linux-gnu.so was already added from /workspace/python/python/bystro/_rs.cpython-311-x86_64-linux-gnu.so, can't added it from /workspace/python/target/release/maturin/libbystro.so
87.78       Error: command ['maturin', 'pep517', 'build-wheel', '-i', '/usr/local/bin/python', '--compatibility', 'off'] returned non-zero exit status 1
87.78       [end of output]
87.78   
87.78   note: This error originates from a subprocess, and is likely not a problem with pip.
87.78   ERROR: Failed building wheel for bystro
87.78 Failed to build bystro
87.82 ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (bystro)
------
Dockerfile.python:52
--------------------
  50 |     
  51 |     # Install Python and dependencies
  52 | >>> RUN pip install --upgrade pip && pip install python/ -r python/requirements-dev.txt
  53 |     
  54 |     COPY ./Makefile ./
--------------------
ERROR: failed to solve: process "/bin/sh -c pip install --upgrade pip && pip install python/ -r python/requirements-dev.txt" did not complete successfully: exit code: 1

I ran curl -fsSL https://raw.githubusercontent.com/skaji/cpm/main/cpm | perl - install -g App::cpm. --show-build-log-on-failure in same environment, but had trouble with that command, relevant log below:

FAIL resolve App::cpm.
0 distribution installed.
2024-09-17T17:59:21,792004| Running cpm 0.997017 (-) on perl 5.34.0 built for x86_64-linux-gnu-thread-multi (/usr/bin/perl)
2024-09-17T17:59:21,792004| This is a self-contained version, 0.997017 (https://github.com/skaji/cpm/tree/0.997017)
2024-09-17T17:59:21,792004| Command line arguments are: install -g App::cpm. --show-build-log-on-failure

2024-09-17T17:59:22,792012,App::cpm.| MetaCPAN, skip, because MetaCPAN is configured to resolve dev releases only
2024-09-17T17:59:22,792012,App::cpm.| MetaDB, 400 Bad Request, https://cpanmetadb.plackperl.org/v1.0/package/App::cpm.
2024-09-17T17:59:22,792012,App::cpm.| MetaCPAN, 404 Not Found, https://fastapi.metacpan.org/v1/download_url/App::cpm.
2024-09-17T17:59:22,792012,App::cpm.| Failed to resolve App::cpm.
2024-09-17T17:59:22,792004| --
2024-09-17T17:59:22,792004| Installation failed. The direct cause of the failure comes from the following packages/distributions; you may want to grep this log file by them:
2024-09-17T17:59:22,792004|  * App::cpm.

Here are my perl and curl versions for reference: Perl version: 5.34.0 curl version: 7.81.0

Ran the following with no issues.

# install msgpack fork
cpm install -g https://github.com/bystrogenomics/msgpack-perl.git

# install MouseX::Getopt despite some tests failing
cpm install -g --no-test MouseX::Getopt

# install LMDB_File that comes with latest LMDB
# NOTE: you will need mysql_config to install this
#       ubuntu 22.04 LTS => sudo apt install -y libmariadb-dev libmariadb-dev-compat
#       amazon 2023 => sudo yum install -y <mariadb105>
git clone --depth 1 --recurse-submodules https://github.com/salortiz/LMDB_File.git \
  && cd LMDB_File \
  && cpanm . \
  && cd .. \
  && rm -rf LMDB_File

# install mysql driver
# NOTE: you will need mysql_config to install this
#       ubuntu 22.04 LTS => sudo apt install -y libmariadb-dev libmariadb-dev-compat
#       amazon 2023 => sudo yum install -y <mariadb105>
cpm install -g DBD::MariaDB@1.23

When I tried to run # install dependencies cpm install -g --with-develop

I got:

Command 'cpm' not found, but can be installed with:
sudo apt install cpm
Command 'dzil' not found, but can be installed with:
sudo apt install libdist-zilla-perl

After installing those, got the following message when running the last two lines:

repos/bystro/perl$ cpm install -g --with-develop
Warning: Can't attach to parent, ptrace safety *not* obtained!
cpm: invalid option -- 'g'
cpm: unrecognized option '--with-develop'
Try `cpm --help' for more information.

repos/bystro/perl$ cpm install -g --show-build-log-on-failure $(dzil authordeps --missing)

Warning: Can't attach to parent, ptrace safety *not* obtained!
cpm: invalid option -- 'g'
cpm: unrecognized option '--show-build-log-on-failure'
Try `cpm --help' for more information.
dzil authordeps only works on dist.ini files, and you don't have one
Warning: Can't attach to parent, ptrace safety *not* obtained!
cpm: invalid option -- 'g'
cpm: unrecognized option '--show-build-log-on-failure'
Try `cpm --help' for more information.

Trying out the dzil commands:

cpanm --quiet Dist::Zilla Archive::Tar::Wrapper

# Install build dependencies
dzil authordeps --missing | cpanm --quiet

# Install Bystro dependencies
dzil listdeps --missing | cpanm --quiet

# Install Bystro
dzil install
!
! Can't write to /usr/local/share/perl/5.34.0 and /usr/local/bin: Installing modules to /home/username/perl5
! To turn off this warning, you have to do one of the following:
!   - run me as a root or with --sudo option (to install to /usr/local/share/perl/5.34.0 and /usr/local/bin)
!   - Configure local::lib in your existing shell to set PERL_MM_OPT etc.
!   - Install local::lib by running the following commands
!
!         cpanm --local-lib=~/perl5 local::lib && eval $(perl -I ~/perl5/lib/perl5/ -Mlocal::lib)
!
Dist::Zilla is up to date. (6.032)
Archive::Tar::Wrapper is up to date. (0.42)
dzil authordeps only works on dist.ini files, and you don't have one
no configuration (e.g, dist.ini) found at /usr/share/perl5/Dist/Zilla/App.pm line 153.
!
! Can't write to /usr/local/share/perl/5.34.0 and /usr/local/bin: Installing modules to /home/username/perl5
! To turn off this warning, you have to do one of the following:
!   - run me as a root or with --sudo option (to install to /usr/local/share/perl/5.34.0 and /usr/local/bin)
!   - Configure local::lib in your existing shell to set PERL_MM_OPT etc.
!   - Install local::lib by running the following commands
!
!         cpanm --local-lib=~/perl5 local::lib && eval $(perl -I ~/perl5/lib/perl5/ -Mlocal::lib)
!
Successfully installed no-0.0.2
! Couldn't find module or a distribution configuration
! Couldn't find module or a distribution (e.g,
! Couldn't find module or a distribution dist.ini)
! Couldn't find module or a distribution found
1 distribution installed
no configuration (e.g, dist.ini) found
no configuration (e.g, dist.ini) found at /usr/share/perl5/Dist/Zilla/App.pm line 153.

Ran the following with no issues.

# install msgpack fork
cpm install -g https://github.com/bystrogenomics/msgpack-perl.git

# install MouseX::Getopt despite some tests failing
cpm install -g --no-test MouseX::Getopt

# install LMDB_File that comes with latest LMDB
# NOTE: you will need mysql_config to install this
#       ubuntu 22.04 LTS => sudo apt install -y libmariadb-dev libmariadb-dev-compat
#       amazon 2023 => sudo yum install -y <mariadb105>
git clone --depth 1 --recurse-submodules https://github.com/salortiz/LMDB_File.git \
  && cd LMDB_File \
  && cpanm . \
  && cd .. \
  && rm -rf LMDB_File

# install mysql driver
# NOTE: you will need mysql_config to install this
#       ubuntu 22.04 LTS => sudo apt install -y libmariadb-dev libmariadb-dev-compat
#       amazon 2023 => sudo yum install -y <mariadb105>
cpm install -g DBD::MariaDB@1.23

When I tried to run # install dependencies cpm install -g --with-develop

I got:

Command 'cpm' not found, but can be installed with:
sudo apt install cpm
Command 'dzil' not found, but can be installed with:
sudo apt install libdist-zilla-perl

After installing those, got the following message when running the last two lines:

repos/bystro/perl$ cpm install -g --with-develop
Warning: Can't attach to parent, ptrace safety *not* obtained!
cpm: invalid option -- 'g'
cpm: unrecognized option '--with-develop'
Try `cpm --help' for more information.

repos/bystro/perl$ cpm install -g --show-build-log-on-failure $(dzil authordeps --missing)

Warning: Can't attach to parent, ptrace safety *not* obtained!
cpm: invalid option -- 'g'
cpm: unrecognized option '--show-build-log-on-failure'
Try `cpm --help' for more information.
dzil authordeps only works on dist.ini files, and you don't have one
Warning: Can't attach to parent, ptrace safety *not* obtained!
cpm: invalid option -- 'g'
cpm: unrecognized option '--show-build-log-on-failure'
Try `cpm --help' for more information.

I've seen a similar issue, on what I suspect was a broken install. What does cpm --help show?

I suspect there is a different cpm installed, that is not the package manager.

Here is what mine shows:

alexkotlar@alexkotlar-System-Product-Name:~$ cpm --help
NAME
    cpm - a fast CPAN module installer

SYNOPSIS
    # install modules into local/
    > cpm install Module1 Module2 ...

    # install modules with verbose messages
    > cpm install -v Module

    # from cpmfile/cpanfile (with cpanfile.snapshot if any)
    > cpm install

    # from metafile (META.json or MYMETA.json)
    > perl Makefile.PL && cpm install --metafile MYMETA.json

    # install module into current @INC instead of local/
    > cpm install -g Module

    # read modules from STDIN by specifying "-" as an argument
    > echo Module1 Module2 | cpm install -

    # prefer TRIAL release
    > cpm install --dev Moose

    # install modules as if version of your perl is 5.8.5
    # so that modules which are not core in 5.8.5 will be installed
    > cpm install --target-perl 5.8.5

    # resolve distribution names from DARKPAN/modules/02packages.details.txt.gz
    # and fetch distibutions from DARKPAN/authors/id/...
    > cpm install --resolver 02packages,http://example.com/darkpan Your::Module
    > cpm install --resolver 02packages,file:///path/to/darkpan    Your::Module

    # specify types/phases in cpmfile/cpanfile/metafile by "--with-*" and "--without-*" options
    > cpm install --with-recommends --without-test

OPTIONS
    -w, --workers=N
          number of workers, default: 5
    -L, --local-lib-contained=DIR
          directory to install modules into, default: local/
    -g, --global
          install modules into current @INC instead of local/
    -v, --verbose
          verbose mode; you can see what is going on
        --prebuilt, --no-prebuilt
          save builds for CPAN distributions; and later, install the prebuilts if available
          default: on; you can also set $ENV{PERL_CPM_PREBUILT} false to disable this option
        --target-perl=VERSION  (EXPERIMENTAL)
          install modules as if verison is your perl is VERSION
        --mirror=URL
          base url for the CPAN mirror to use, cannot be used multiple times. Use --resolver instead.
          default: https://cpan.metacpan.org
        --pp, --pureperl-only
          prefer pureperl only build
        --static-install, --no-static-install
          enable/disable the static install, default: enable
    -r, --resolver=class,args (EXPERIMENTAL, will be removed or renamed)
          specify resolvers, you can use --resolver multiple times
          available classes: metadb/metacpan/02packages/snapshot
        --no-default-resolvers
          even if you specify --resolver, cpm continues using the default resolvers.
          if you just want to use your resolvers specifed by --resolver,
          you should specify --no-default-resolvers too
        --reinstall
          reinstall the distribution even if you already have the latest version installed
        --dev (EXPERIMENTAL)
          resolve TRIAL distributions too
        --color, --no-color
          turn on/off color output, default: on
        --test, --no-test
          run test cases, default: no
        --man-pages
          generate man pages
        --retry, --no-retry
          retry configure/build/test/install if fails, default: retry
        --show-build-log-on-failure
          show build.log on failure, default: off
        --configure-timeout=sec, --build-timeout=sec, --test-timeout=sec
          specify configure/build/test timeout second, default: 60sec, 3600sec, 1800sec
        --show-progress, --no-show-progress
          show progress, default: on
        --cpmfile=path
          specify cpmfile path, default: ./cpm.yml
        --cpanfile=path
          specify cpanfile path, default: ./cpanfile
        --metafile=path
          specify META file path, default: N/A
        --snapshot=path
          specify cpanfile.snapshot path, default: ./cpanfile.snapshot
    -V, --version
          show version
    -h, --help
          show this help
        --feature=identifier
          specify the feature to enable in cpmfile/cpanfile/metafile; you can use --feature multiple times
        --with-requires,   --without-requires   (default: with)
        --with-recommends, --without-recommends (default: without)
        --with-suggests,   --without-suggests   (default: without)
        --with-configure,  --without-configure  (default: without)
        --with-build,      --without-build      (default: with)
        --with-test,       --without-test       (default: with)
        --with-runtime,    --without-runtime    (default: with)
        --with-develop,    --without-develop    (default: without)
          specify types/phases of dependencies in cpmfile/cpanfile/metafile to be installed
        --with-all
          shortcut for --with-requires, --with-recommends, --with-suggests,
          --with-configure, --with-build, --with-test, --with-runtime and --with-develop

COPYRIGHT AND LICENSE
    Copyright 2015 Shoichi Kaji <skaji@cpan.org>

    This library is free software; you can redistribute it and/or modify it
    under the same terms as Perl itself.

edit: I've removed the dzil commands for now; will add back as separate build commands

I created a new environment and ran repos/bystro$ ./install-apt.sh on the workstation and it got through a lot of the install, log on where it failed below:

Bystro Go dependency installation complete.
Please start a new shell session or run 'source /home/ctrevino/.profile' to apply the changes.

Exporting paths from /mnt/ssd1/ctrevinodev/repos/bystro to /home/ctrevino/.profile

Added to /home/ctrevino/.profile: export PERL5LIB=$PERL5LIB:/mnt/ssd1/ctrevinodev/repos/bystro/perl/lib
Added to /home/ctrevino/.profile: export PATH=$PATH:/mnt/ssd1/ctrevinodev/repos/bystro/perl/bin
\nTesting Bystro installation
Agent pid 3413806
Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/dbmanager-cursor.t line 11.
BEGIN failed--compilation aborted at ./t/dbmanager-cursor.t line 11.
./t/dbmanager-cursor.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       0;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/dbmanager-del.t line 13.
BEGIN failed--compilation aborted at ./t/dbmanager-del.t line 13.
./t/dbmanager-del.t .................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       0;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq.pm line 12.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq.pm line 12.
Compilation failed in require at ./t/definition.t line 2.
BEGIN failed--compilation aborted at ./t/definition.t line 2.
./t/definition.t ....................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       0;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Headers", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 11
        require Seq/Headers.pm called at ./t/headers.t line 7
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 0
Compilation failed in require at ./t/headers.t line 7.
BEGIN failed--compilation aborted at ./t/headers.t line 7.
./t/headers.t .......................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       0;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/InputFile.pm line 14.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/InputFile.pm line 14.
Compilation failed in require at ./t/inputFile.t line 7.
BEGIN failed--compilation aborted at ./t/inputFile.t line 7.
./t/inputFile.t ........................................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       1;0  1/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Headers", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 11
        require Seq/Headers.pm called at ./t/output.t line 7
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 0
Compilation failed in require at ./t/output.t line 7.
BEGIN failed--compilation aborted at ./t/output.t line 7.
./t/output.t ........................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       1;0  1/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Output::Delimiters", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Output/Delimiters.pm line 8
        require Seq/Output/Delimiters.pm called at ./t/output/delimiters.t line 11
        TestMe::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Output/Delimiters.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Output/Delimiters.pm line 0
Compilation failed in require at ./t/output/delimiters.t line 11.
BEGIN failed--compilation aborted at ./t/output/delimiters.t line 11.
./t/output/delimiters.t ................................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       3;0  3/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Mock", "Seq::Role::Message", "Seq::Role::IO") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message", "Seq::Role::IO") called at ./t/role/02-message.t line 10
./t/role/02-message.t .................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/msgpack.t .......................................... ok             
===(       8;0  1/5  1/?  1/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Base/MapTrackNames.pm line 15.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Base/MapTrackNames.pm line 15.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Base.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Base.pm line 17.
Compilation failed in require at ./t/tracks/base/normalizeWantedChr.t line 8.
BEGIN failed--compilation aborted at ./t/tracks/base/normalizeWantedChr.t line 8.
./t/tracks/base/normalizeWantedChr.t ................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      17;0  3/5  4/?  3/?  1/?  1/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/build/build_field_transformations.t line 8.
BEGIN failed--compilation aborted at ./t/tracks/build/build_field_transformations.t line 8.
./t/tracks/build/build_field_transformations.t ......... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      18;0  3/5  4/?  3/?  2/?  1/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/build/coerceFeatureType.t line 8.
BEGIN failed--compilation aborted at ./t/tracks/build/coerceFeatureType.t line 8.
./t/tracks/build/coerceFeatureType.t ................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/role/1-sparseArrays.t .............................. ok             
./t/tracks/base/02-convert-pack.t ...................... ok             
./t/tracks/base/types.t ................................ ok             
===(      33;0  10/?  4/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/build/coerceUndefinedValues.t line 7.
BEGIN failed--compilation aborted at ./t/tracks/build/coerceUndefinedValues.t line 7.
./t/tracks/build/coerceUndefinedValues.t ............... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/tracks/build/02-local-files.t ...................... ok             
===(      39;0  14/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/build/ref_cannot_be_skipped.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/build/ref_cannot_be_skipped.t line 14.
./t/tracks/build/ref_cannot_be_skipped.t ............... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      41;0  16/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/cadd/integration.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/cadd/integration.t line 15.
./t/tracks/cadd/integration.t .......................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      43;0  18/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/chrWanted.t line 7.
BEGIN failed--compilation aborted at ./t/tracks/chrWanted.t line 7.
./t/tracks/chrWanted.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      45;0  20/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/sparse/build_clinvar.t line 9.
BEGIN failed--compilation aborted at ./t/tracks/sparse/build_clinvar.t line 9.
./t/tracks/sparse/build_clinvar.t ...................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      45;0  20/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Moo/Role.pm in @INC (you may need to install the Moo::Role module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Parallel/ForkManager/Child.pm line 12.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Parallel/ForkManager/Child.pm line 12.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/Parallel/ForkManager.pm line 12.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Parallel/ForkManager.pm line 12.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Build.pm line 15.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Build.pm line 15.
Compilation failed in require at ./t/tracks/gene/construct.t line 4.
BEGIN failed--compilation aborted at ./t/tracks/gene/construct.t line 4.
./t/tracks/gene/construct.t ............................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      47;0  22/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/join.t line 13.
BEGIN failed--compilation aborted at ./t/tracks/gene/join.t line 13.
./t/tracks/gene/join.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/tracks/base/01-convert.t ........................... ok             
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/join_no_build.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/gene/join_no_build.t line 14.
./t/tracks/gene/join_no_build.t ........................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/ncrna.t line 13.
BEGIN failed--compilation aborted at ./t/tracks/gene/ncrna.t line 13.
./t/tracks/gene/ncrna.t ................................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/overlap.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/gene/overlap.t line 14.
./t/tracks/gene/overlap.t .............................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/simple.t line 13.
BEGIN failed--compilation aborted at ./t/tracks/gene/simple.t line 13.
./t/tracks/gene/simple.t ............................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/region.t line 13.
BEGIN failed--compilation aborted at ./t/tracks/gene/region.t line 13.
./t/tracks/gene/region.t ............................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      49;0  0/?  0/?  0/?  0/?  1/4  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/score/integration.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/score/integration.t line 15.
./t/tracks/score/integration.t ......................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/tracks/score/build/rounder.t ....................... ok             
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/vcf/integration_scrambled_multiple_files.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/vcf/integration_scrambled_multiple_files.t line 15.
./t/tracks/vcf/integration_scrambled_multiple_files.t .. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/? )======Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/nearest/integration.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/nearest/integration.t line 14.
./t/tracks/nearest/integration.t ....................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/? )===========Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/reference/integration.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/reference/integration.t line 14.
./t/tracks/reference/integration.t ..................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/? )================Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/vcf/clinvar.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/vcf/clinvar.t line 15.
./t/tracks/vcf/clinvar.t ............................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/? )=====================Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/merge.t line 7.
BEGIN failed--compilation aborted at ./t/tracks/merge.t line 7.
./t/tracks/merge.t ..................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/? )==========================Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Tracks::Gene::Site", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Site.pm line 25
        require Seq/Tracks/Gene/Site.pm called at ./t/tracks/gene/site.t line 9
        Testing::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Site.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Site.pm line 0
Compilation failed in require at ./t/tracks/gene/site.t line 9.
BEGIN failed--compilation aborted at ./t/tracks/gene/site.t line 9.
./t/tracks/gene/site.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/? )===============================Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/vcf/integration.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/vcf/integration.t line 15.
./t/tracks/vcf/integration.t ........................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/? )====================================Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/utils/filterCadd.t line 7.
BEGIN failed--compilation aborted at ./t/utils/filterCadd.t line 7.
./t/utils/filterCadd.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/? )=========================================Could not load class (Utils::Base) because : Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/Base.pm line 14.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/Base.pm line 14.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Utils::Base") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Meta/Class.pm line 58
        Mouse::Meta::Class::superclasses(Mouse::Meta::Class=HASH(0x5629a3f98fb8), "Utils::Base") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 35
        Mouse::extends("Utils::Base") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/DbSnp2FormatInfo.pm line 23
        require Utils/DbSnp2FormatInfo.pm called at ./t/utils/dbsnp2FormatInfo.t line 9
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/DbSnp2FormatInfo.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/DbSnp2FormatInfo.pm line 0
Compilation failed in require at ./t/utils/dbsnp2FormatInfo.t line 9.
BEGIN failed--compilation aborted at ./t/utils/dbsnp2FormatInfo.t line 9.
./t/utils/dbsnp2FormatInfo.t ........................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/? )==============================================
READ COMMAND: cat /mnt/ssd1/ctrevinodev/repos/bystro/perl/t/utils/scripts/vcf_example.vcf

Skipping header line: ##fileformat=VCFv4.2

Skipping header line: ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">

Skipping header line: #CHROM    POS     ID      REF     ALT     QUAL    FILTER  INFO

Processing first line: 2        200     .       A       T       .       .       AF=0.01

Opened: /mnt/ssd1/ctrevinodev/repos/bystro/perl/t/utils/scripts/vcf_example.vcf.2.vcf
Opened: /mnt/ssd1/ctrevinodev/repos/bystro/perl/t/utils/scripts/vcf_example.vcf.1.vcf
Opened: /mnt/ssd1/ctrevinodev/repos/bystro/perl/t/utils/scripts/vcf_example.vcf.3.vcf
Processed 9 lines
Closing: 3
Closing: 2
Closing: 1
./t/utils/scripts/split_by_chr.t ....................... ok             
./t/utils/sqlWriter.t .................................. Could not load class (Seq::Role::IO) because : Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Role::IO", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Role.pm line 32
        Mouse::Role::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/IO.pm line 23
        require Seq/Role/IO.pm called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295
        eval {...} called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295
        Mouse::Util::_try_load_one_class("Seq::Role::IO") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 303
        Mouse::Util::load_class("Seq::Role::IO") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Utils::SqlWriter", "Seq::Role::IO", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::IO", "Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/SqlWriter.pm line 17
        require Utils/SqlWriter.pm called at ./t/utils/sqlWriter.t line 9
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/IO.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/IO.pm line 0
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::IO") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Utils::SqlWriter", "Seq::Role::IO", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::IO", "Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/SqlWriter.pm line 17
        require Utils/SqlWriter.pm called at ./t/utils/sqlWriter.t line 9
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/SqlWriter.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/SqlWriter.pm line 0
Compilation failed in require at ./t/utils/sqlWriter.t line 9.
BEGIN failed--compilation aborted at ./t/utils/sqlWriter.t line 9.
./t/utils/sqlWriter.t .................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 

Test Summary Report
-------------------
./t/dbmanager-cursor.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/dbmanager-del.t                                  (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/definition.t                                     (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/headers.t                                        (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/inputFile.t                                      (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/output.t                                         (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/output/delimiters.t                              (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/role/02-message.t                                (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/base/normalizeWantedChr.t                 (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/build/build_field_transformations.t       (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/build/coerceFeatureType.t                 (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/build/coerceUndefinedValues.t             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/build/ref_cannot_be_skipped.t             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/cadd/integration.t                        (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/chrWanted.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/sparse/build_clinvar.t                    (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/construct.t                          (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/join.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/join_no_build.t                      (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/ncrna.t                              (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/overlap.t                            (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/simple.t                             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/region.t                             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/score/integration.t                       (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/vcf/integration_scrambled_multiple_files.t (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/nearest/integration.t                     (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/reference/integration.t                   (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/vcf/clinvar.t                             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/merge.t                                   (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/site.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/vcf/integration.t                         (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/utils/filterCadd.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/utils/dbsnp2FormatInfo.t                         (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/utils/sqlWriter.t                                (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
Files=42, Tests=67,  0 wallclock secs ( 0.05 usr  0.05 sys +  2.39 cusr  0.53 csys =  3.02 CPU)
Result: FAIL

I created a new environment and ran repos/bystro$ ./install-apt.sh on the workstation and it got through a lot of the install, log on where it failed below:

Bystro Go dependency installation complete.
Please start a new shell session or run 'source /home/ctrevino/.profile' to apply the changes.

Exporting paths from /mnt/ssd1/ctrevinodev/repos/bystro to /home/ctrevino/.profile

Added to /home/ctrevino/.profile: export PERL5LIB=$PERL5LIB:/mnt/ssd1/ctrevinodev/repos/bystro/perl/lib
Added to /home/ctrevino/.profile: export PATH=$PATH:/mnt/ssd1/ctrevinodev/repos/bystro/perl/bin
\nTesting Bystro installation
Agent pid 3413806
Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/dbmanager-cursor.t line 11.
BEGIN failed--compilation aborted at ./t/dbmanager-cursor.t line 11.
./t/dbmanager-cursor.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       0;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/dbmanager-del.t line 13.
BEGIN failed--compilation aborted at ./t/dbmanager-del.t line 13.
./t/dbmanager-del.t .................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       0;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq.pm line 12.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq.pm line 12.
Compilation failed in require at ./t/definition.t line 2.
BEGIN failed--compilation aborted at ./t/definition.t line 2.
./t/definition.t ....................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       0;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Headers", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 11
        require Seq/Headers.pm called at ./t/headers.t line 7
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 0
Compilation failed in require at ./t/headers.t line 7.
BEGIN failed--compilation aborted at ./t/headers.t line 7.
./t/headers.t .......................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       0;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/InputFile.pm line 14.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/InputFile.pm line 14.
Compilation failed in require at ./t/inputFile.t line 7.
BEGIN failed--compilation aborted at ./t/inputFile.t line 7.
./t/inputFile.t ........................................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       1;0  1/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Headers", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 11
        require Seq/Headers.pm called at ./t/output.t line 7
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Headers.pm line 0
Compilation failed in require at ./t/output.t line 7.
BEGIN failed--compilation aborted at ./t/output.t line 7.
./t/output.t ........................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       1;0  1/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Output::Delimiters", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Output/Delimiters.pm line 8
        require Seq/Output/Delimiters.pm called at ./t/output/delimiters.t line 11
        TestMe::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Output/Delimiters.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Output/Delimiters.pm line 0
Compilation failed in require at ./t/output/delimiters.t line 11.
BEGIN failed--compilation aborted at ./t/output/delimiters.t line 11.
./t/output/delimiters.t ................................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(       3;0  3/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Mock", "Seq::Role::Message", "Seq::Role::IO") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message", "Seq::Role::IO") called at ./t/role/02-message.t line 10
./t/role/02-message.t .................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/msgpack.t .......................................... ok             
===(       8;0  1/5  1/?  1/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Base/MapTrackNames.pm line 15.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Base/MapTrackNames.pm line 15.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Base.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Base.pm line 17.
Compilation failed in require at ./t/tracks/base/normalizeWantedChr.t line 8.
BEGIN failed--compilation aborted at ./t/tracks/base/normalizeWantedChr.t line 8.
./t/tracks/base/normalizeWantedChr.t ................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      17;0  3/5  4/?  3/?  1/?  1/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/build/build_field_transformations.t line 8.
BEGIN failed--compilation aborted at ./t/tracks/build/build_field_transformations.t line 8.
./t/tracks/build/build_field_transformations.t ......... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      18;0  3/5  4/?  3/?  2/?  1/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/build/coerceFeatureType.t line 8.
BEGIN failed--compilation aborted at ./t/tracks/build/coerceFeatureType.t line 8.
./t/tracks/build/coerceFeatureType.t ................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/role/1-sparseArrays.t .............................. ok             
./t/tracks/base/02-convert-pack.t ...................... ok             
./t/tracks/base/types.t ................................ ok             
===(      33;0  10/?  4/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/build/coerceUndefinedValues.t line 7.
BEGIN failed--compilation aborted at ./t/tracks/build/coerceUndefinedValues.t line 7.
./t/tracks/build/coerceUndefinedValues.t ............... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/tracks/build/02-local-files.t ...................... ok             
===(      39;0  14/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/build/ref_cannot_be_skipped.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/build/ref_cannot_be_skipped.t line 14.
./t/tracks/build/ref_cannot_be_skipped.t ............... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      41;0  16/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/cadd/integration.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/cadd/integration.t line 15.
./t/tracks/cadd/integration.t .......................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      43;0  18/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/chrWanted.t line 7.
BEGIN failed--compilation aborted at ./t/tracks/chrWanted.t line 7.
./t/tracks/chrWanted.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      45;0  20/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/sparse/build_clinvar.t line 9.
BEGIN failed--compilation aborted at ./t/tracks/sparse/build_clinvar.t line 9.
./t/tracks/sparse/build_clinvar.t ...................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      45;0  20/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Moo/Role.pm in @INC (you may need to install the Moo::Role module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Parallel/ForkManager/Child.pm line 12.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Parallel/ForkManager/Child.pm line 12.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/Parallel/ForkManager.pm line 12.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Parallel/ForkManager.pm line 12.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Build.pm line 15.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Build.pm line 15.
Compilation failed in require at ./t/tracks/gene/construct.t line 4.
BEGIN failed--compilation aborted at ./t/tracks/gene/construct.t line 4.
./t/tracks/gene/construct.t ............................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      47;0  22/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/join.t line 13.
BEGIN failed--compilation aborted at ./t/tracks/gene/join.t line 13.
./t/tracks/gene/join.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/tracks/base/01-convert.t ........................... ok             
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/join_no_build.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/gene/join_no_build.t line 14.
./t/tracks/gene/join_no_build.t ........................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/ncrna.t line 13.
BEGIN failed--compilation aborted at ./t/tracks/gene/ncrna.t line 13.
./t/tracks/gene/ncrna.t ................................ Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/overlap.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/gene/overlap.t line 14.
./t/tracks/gene/overlap.t .............................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/simple.t line 13.
BEGIN failed--compilation aborted at ./t/tracks/gene/simple.t line 13.
./t/tracks/gene/simple.t ............................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      48;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/gene/region.t line 13.
BEGIN failed--compilation aborted at ./t/tracks/gene/region.t line 13.
./t/tracks/gene/region.t ............................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      49;0  0/?  0/?  0/?  0/?  1/4  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/score/integration.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/score/integration.t line 15.
./t/tracks/score/integration.t ......................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
./t/tracks/score/build/rounder.t ....................... ok             
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?... )===Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/vcf/integration_scrambled_multiple_files.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/vcf/integration_scrambled_multiple_files.t line 15.
./t/tracks/vcf/integration_scrambled_multiple_files.t .. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/? )======Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/nearest/integration.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/nearest/integration.t line 14.
./t/tracks/nearest/integration.t ....................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/? )===========Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/reference/integration.t line 14.
BEGIN failed--compilation aborted at ./t/tracks/reference/integration.t line 14.
./t/tracks/reference/integration.t ..................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/?  0/? )================Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/vcf/clinvar.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/vcf/clinvar.t line 15.
./t/tracks/vcf/clinvar.t ............................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/?  0/? )=====================Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/DBManager.pm line 21.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Build.pm line 17.
Compilation failed in require at ./t/tracks/merge.t line 7.
BEGIN failed--compilation aborted at ./t/tracks/merge.t line 7.
./t/tracks/merge.t ..................................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/?  0/? )==========================Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Tracks::Gene::Site", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Site.pm line 25
        require Seq/Tracks/Gene/Site.pm called at ./t/tracks/gene/site.t line 9
        Testing::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Site.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Tracks/Gene/Site.pm line 0
Compilation failed in require at ./t/tracks/gene/site.t line 9.
BEGIN failed--compilation aborted at ./t/tracks/gene/site.t line 9.
./t/tracks/gene/site.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/?  0/? )===============================Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/tracks/vcf/integration.t line 15.
BEGIN failed--compilation aborted at ./t/tracks/vcf/integration.t line 15.
./t/tracks/vcf/integration.t ........................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/?  0/? )====================================Can't locate Type/Params.pm in @INC (you may need to install the Type::Params module) (@INC contains: t/lib /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at t/lib/TestUtils.pm line 9.
BEGIN failed--compilation aborted at t/lib/TestUtils.pm line 9.
Compilation failed in require at ./t/utils/filterCadd.t line 7.
BEGIN failed--compilation aborted at ./t/utils/filterCadd.t line 7.
./t/utils/filterCadd.t ................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/?  0/? )=========================================Could not load class (Utils::Base) because : Can't locate Type/Library.pm in @INC (you may need to install the Type::Library module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Types/Path/Tiny.pm line 11.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/Base.pm line 14.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/Base.pm line 14.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Utils::Base") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Meta/Class.pm line 58
        Mouse::Meta::Class::superclasses(Mouse::Meta::Class=HASH(0x5629a3f98fb8), "Utils::Base") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 35
        Mouse::extends("Utils::Base") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/DbSnp2FormatInfo.pm line 23
        require Utils/DbSnp2FormatInfo.pm called at ./t/utils/dbsnp2FormatInfo.t line 9
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/DbSnp2FormatInfo.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/DbSnp2FormatInfo.pm line 0
Compilation failed in require at ./t/utils/dbsnp2FormatInfo.t line 9.
BEGIN failed--compilation aborted at ./t/utils/dbsnp2FormatInfo.t line 9.
./t/utils/dbsnp2FormatInfo.t ........................... Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 
===(      52;0  0/?  0/? )==============================================
READ COMMAND: cat /mnt/ssd1/ctrevinodev/repos/bystro/perl/t/utils/scripts/vcf_example.vcf

Skipping header line: ##fileformat=VCFv4.2

Skipping header line: ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">

Skipping header line: #CHROM    POS     ID      REF     ALT     QUAL    FILTER  INFO

Processing first line: 2        200     .       A       T       .       .       AF=0.01

Opened: /mnt/ssd1/ctrevinodev/repos/bystro/perl/t/utils/scripts/vcf_example.vcf.2.vcf
Opened: /mnt/ssd1/ctrevinodev/repos/bystro/perl/t/utils/scripts/vcf_example.vcf.1.vcf
Opened: /mnt/ssd1/ctrevinodev/repos/bystro/perl/t/utils/scripts/vcf_example.vcf.3.vcf
Processed 9 lines
Closing: 3
Closing: 2
Closing: 1
./t/utils/scripts/split_by_chr.t ....................... ok             
./t/utils/sqlWriter.t .................................. Could not load class (Seq::Role::IO) because : Could not load class (Seq::Role::Message) because : Can't locate YAML/Syck.pm in @INC (you may need to install the YAML::Syck module) (@INC contains: /home/ctrevino/perl5/lib/perl5/5.34.0/x86_64-linux /home/ctrevino/perl5/lib/perl5/5.34.0 /home/ctrevino/perl5/lib/perl5/x86_64-linux /home/ctrevino/perl5/lib/perl5 /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/site_perl/5.34.0 /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0/x86_64-linux /home/ctrevino/perl5/perlbrew/perls/perl-5.34.0/lib/5.34.0) at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
BEGIN failed--compilation aborted at /home/ctrevino/perl5/lib/perl5/Beanstalk/Client.pm line 8.
Compilation failed in require at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
BEGIN failed--compilation aborted at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/Message.pm line 20.
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Seq::Role::IO", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Role.pm line 32
        Mouse::Role::with("Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/IO.pm line 23
        require Seq/Role/IO.pm called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295
        eval {...} called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295
        Mouse::Util::_try_load_one_class("Seq::Role::IO") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 303
        Mouse::Util::load_class("Seq::Role::IO") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Utils::SqlWriter", "Seq::Role::IO", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::IO", "Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/SqlWriter.pm line 17
        require Utils/SqlWriter.pm called at ./t/utils/sqlWriter.t line 9
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/IO.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Seq/Role/IO.pm line 0
Compilation failed in require at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 295.
 at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 304.
        Mouse::Util::load_class("Seq::Role::IO") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse/Util.pm line 327
        Mouse::Util::apply_all_roles("Utils::SqlWriter", "Seq::Role::IO", "Seq::Role::Message") called at /home/ctrevino/perl5/lib/perl5/x86_64-linux/Mouse.pm line 40
        Mouse::with("Seq::Role::IO", "Seq::Role::Message") called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/SqlWriter.pm line 17
        require Utils/SqlWriter.pm called at ./t/utils/sqlWriter.t line 9
        main::BEGIN() called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/SqlWriter.pm line 0
        eval {...} called at /mnt/ssd1/ctrevinodev/repos/bystro/perl/lib/Utils/SqlWriter.pm line 0
Compilation failed in require at ./t/utils/sqlWriter.t line 9.
BEGIN failed--compilation aborted at ./t/utils/sqlWriter.t line 9.
./t/utils/sqlWriter.t .................................. Dubious, test returned 2 (wstat 512, 0x200)
No subtests run 

Test Summary Report
-------------------
./t/dbmanager-cursor.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/dbmanager-del.t                                  (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/definition.t                                     (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/headers.t                                        (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/inputFile.t                                      (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/output.t                                         (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/output/delimiters.t                              (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/role/02-message.t                                (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/base/normalizeWantedChr.t                 (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/build/build_field_transformations.t       (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/build/coerceFeatureType.t                 (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/build/coerceUndefinedValues.t             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/build/ref_cannot_be_skipped.t             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/cadd/integration.t                        (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/chrWanted.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/sparse/build_clinvar.t                    (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/construct.t                          (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/join.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/join_no_build.t                      (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/ncrna.t                              (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/overlap.t                            (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/simple.t                             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/region.t                             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/score/integration.t                       (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/vcf/integration_scrambled_multiple_files.t (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/nearest/integration.t                     (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/reference/integration.t                   (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/vcf/clinvar.t                             (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/merge.t                                   (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/gene/site.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/tracks/vcf/integration.t                         (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/utils/filterCadd.t                               (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/utils/dbsnp2FormatInfo.t                         (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
./t/utils/sqlWriter.t                                (Wstat: 512 Tests: 0 Failed: 0)
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
Files=42, Tests=67,  0 wallclock secs ( 0.05 usr  0.05 sys +  2.39 cusr  0.53 csys =  3.02 CPU)
Result: FAIL

I'm not sure, but it looks like it cannot find the installed libraries. My guess is that you have conflicting paths.

Please add reproduction steps; I don't know what you mean by "new environment"

Ran the following and it ran successfully on the workstation, on a folder outside of my home directory:

repos/bystro$ sudo docker build -t bystro-annotator -f Dockerfile.perl .
[sudo] password for user: 
[+] Building 566.4s (13/13) FINISHED                                                                                                                                                                     docker:default
 => [internal] load build definition from Dockerfile.perl                                                                                                                                                          0.0s
 => => transferring dockerfile: 901B                                                                                                                                                                               0.0s
 => [internal] load metadata for docker.io/library/ubuntu:24.04                                                                                                                                                    0.2s
 => [internal] load .dockerignore                                                                                                                                                                                  0.0s
 => => transferring context: 333B                                                                                                                                                                                  0.0s
 => [1/8] FROM docker.io/library/ubuntu:24.04@sha256:dfc10878be8d8fc9c61cbff33166cb1d1fe44391539243703c72766894fa834a                                                                                              0.0s
 => [internal] load build context                                                                                                                                                                                  0.2s
 => => transferring context: 1.07MB                                                                                                                                                                                0.2s
 => CACHED [2/8] RUN apt update && apt install -y git sudo                                                                                                                                                         0.0s
 => CACHED [3/8] RUN apt-get update && apt-get install -y --no-install-recommends     perl     man-db     groff     libperl-dev                                                                                    0.0s
 => [4/8] COPY perl /bystro/perl                                                                                                                                                                                   0.1s
 => [5/8] COPY go /bystro/go                                                                                                                                                                                       0.1s
 => [6/8] COPY install /bystro/install                                                                                                                                                                             0.1s
 => [7/8] COPY install-apt.sh /bystro/install-apt.sh                                                                                                                                                               0.1s
 => [8/8] RUN cd /bystro && ./install-apt.sh                                                                                                                                                                     558.5s
 => exporting to image                                                                                                                                                                                             6.9s 
 => => exporting layers                                                                                                                                                                                            6.9s 
 => => writing image sha256:56490f19922492bbefe394dc0e86a4c1b24f57758ed88bf5c3239aa98fdb15c0                                                                                                                       0.0s 
 => => naming to docker.io/library/bystro-annotator

Much cleaner and easier to follow instructions with these changes, and was able to install easily once issues were resolved. LGTM!

Recommend to issue a PR in near future with further cleanup of documentation so that it is up to date, and free of typos and old links.

Made an issue to track that https://github.com/bystrogenomics/bystro/issues/573

bystrogenomics / bystro