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bzhanglab / DeepRescore

DeepRescore: rescore PSMs leveraging deep learning-derived peptide features
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Compatibility with FragPipe #8

Open Peer2011 opened 2 years ago

Peer2011 commented 2 years ago

Hi, Is DeepScore compatible with FragPipe as input. Can you also enhance the identification of tryptic peptides using DeepScore. How would this behave for very large datasets.

Best, Peer

wenbostar commented 2 years ago

We're planning to support FragPipe output. But I cannot tell a timeline for this for now. For tryptic peptides, we're working on this. This will be supported in the next version.

Bo