The P values for ORA are calculated by the code:
pValue=1-phyper(.data$overlap - 1, length(interestGene), length(referenceGene) - length(interestGene), .data$size, lower.tail=TRUE, log.p=FALSE)
I want to confirm that the P values for ORA are one-sided.
Looking forward to your reply.
yxngl
commented
1 year ago
The P values for ORA are calculated by the code: pValue=1-phyper(.data$overlap - 1, length(interestGene), length(referenceGene) - length(interestGene), .data$size, lower.tail=TRUE, log.p=FALSE) I want to confirm that the P values for ORA are one-sided. Looking forward to your reply.