might webGestaltR() have a formal parameter to set the seed for permutation tests?

bzhanglab / WebGestaltR

R package for WebGestalt

https://bzhanglab.github.io/WebGestaltR/

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Open chumbleycode opened 3 years ago

chumbleycode commented 3 years ago

This would help us with reproducibility. JC

chumbleycode commented 3 years ago

We currently use 0.05 threshold, but then discard any p-value greater than 0.01. This is a hack to improve reproducibility.