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c3g / GenPipes

GenPipes Read the Docs repository
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DNASeq and Tumorpair have merged - update dnaseq pipeline #254

Closed shaloo closed 2 months ago

shaloo commented 5 months ago

Ref: https://bitbucket.org/mugqic/genpipes/src/dev/pipelines/dnaseq/dnaseq.py

7 protocols now.

'germline_snv', 'germline_sv', 'germline_high_cov', 'somatic_tumor_only', 'somatic_fastpass', 'somatic_ensemble', 'somatic_sv'