cBioPortal GSoC issues - Githubissues

cBioPortal / GSoC

Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects

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Similar Patient Discovery

#116 inodb opened 3 months ago
3
Integrate AlphaMissense into Genome Nexus and cBioPortal

#115 leexgh opened 3 months ago
3
AI/LLM Generated gene alteration and expression based subtyping for each tumor type

#114 inodb opened 3 months ago
8
Fix on the issue tag

#113 ghost closed 5 days ago
0
Frontend visualization and incorporation of single cell data in cBioPortal

#112 sowmiyaa-kumar opened 3 months ago
6
Create an automated metadata harmonization/curation tool

#111 shbrief opened 4 months ago
15
Create pipeline/interface to prioritize variants for OncoKB curation

#110 zhx828 opened 4 months ago
4
PathwayMapper improvements

#109 ugurdogrusoz opened 4 months ago
3
Upgrade cBioPortal to newer version of Node.js and Webdriver.io

#108 alisman opened 4 months ago
5
Add ability to spawn code notebooks from cBioPortal queries

#107 alisman opened 5 months ago
3
Clinical Timeline Standalone Package and Documentation

#106 cannin opened 5 months ago
3
typo error "to to" solve

#105 Meena7681 closed 5 months ago
0
Small typo mistake in README

#104 muhammedanaskhan closed 5 months ago
2
Improve clinical trial curation tool based on CTML from MatchMiner

#103 zhx828 closed 4 months ago
4
Create Chat Bot Interface Trained On Documentation Site

#102 inodb opened 1 year ago
16
Human Tumor Atlas Network - Data Schemas

#101 inodb opened 1 year ago
5
Add gene-level charts to study view for categorical molecular profiles

#100 tmazor opened 1 year ago
9
Show alteration frequencies for groups in OncoPrints

#99 inodb closed 11 months ago
20
Pathway improvements in cBioPortal

#98 ugurdogrusoz opened 1 year ago
7
(Group Comparison) Generic Assay Categorical/Binary data implementation

#97 dippindots closed 4 months ago
7
Create clinical trial curation tool based on CTML from MatchMiner

#96 zhx828 closed 1 year ago
11
Visualize OncoKB annotation and generate sample/patient report

#95 zhx828 opened 1 year ago
20
Improve patient timeline user interface

#94 jagnathan opened 1 year ago
6
Improve Genome Nexus' Command Line Interface Experience

#93 inodb opened 2 years ago
10
Improve Genome Nexus' Mobile and Search Experience

#92 inodb opened 2 years ago
8
Study Comparison Support

#91 Luke-Sikina opened 2 years ago
15
Extend chart types in study view

#90 inodb opened 3 years ago
27
Mutations Tab Enhancements (Clinical Attributes and Search)

#89 inodb closed 2 years ago
1
Lollipop plot in Group Comparison

#88 inodb closed 4 months ago
10
Add Mutation Diagram on Study View for Enhanced Mutation Analysis

#87 inodb opened 3 years ago
20
Interactive web tour

#86 inodb opened 3 years ago
32
Broader use of pathway views in cBioPortal

#85 ugurdogrusoz closed 1 year ago
8
[r-client] cBioPortalData: Example Bioconductor Workflow

#83 LiNk-NY opened 4 years ago
17
Unite Backend Configuration Handling

#82 sheridancbio closed 3 years ago
2
Body map showing locations of sequenced samples in patient view

#81 fongcj closed 3 years ago
1
Extend Filter URL on Study View to allow filtering by protein change

#80 ao508 closed 4 years ago
0
Adding an AI based chat-bot to the website

#79 Vivek1258 closed 4 years ago
3
Single command to run cBioPortal (Docker Compose & Helm Chart)

#78 inodb closed 3 years ago
2
Improve Quick Search for Patients and Samples

#77 Luke-Sikina closed 4 years ago
2
Add some form of cohort selection to the oncoprint

#76 alisman closed 3 years ago
1
OQL helper

#75 adamabeshouse closed 3 years ago
0
"Hint" mode for cBioPortal and OQL editor

#74 alisman closed 4 years ago
5
PathwayMapper viewer and editor improvements

#73 ugurdogrusoz closed 3 years ago
1
Add color blind friendly color scheme for cBioPortal

#72 inodb closed 3 years ago
8
OncoKB Analysis in Study View

#71 zhx828 closed 3 years ago
8
Prototype Spark + Parquet + Spring Boot for web API

#69 jjgao closed 4 years ago
7
Standalone Importer w/Spring Batch

#68 ao508 closed 3 years ago
5
Add Mutation Diagram on Study View for Enhanced Mutation Analysis

#67 jjgao closed 3 years ago
4
Clonal Evolution

#66 fongcj closed 4 years ago
4
Mutations tab improvement

#65 jjgao closed 3 years ago
9