cBioPortal / cbioportal

cBioPortal for Cancer Genomics
https://cbioportal.org
GNU Affero General Public License v3.0
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Clinical Data Download only gets first 500 records #10794

Closed inodb closed 4 months ago

inodb commented 4 months ago

E.g. for this study:

https://www.cbioportal.org/study/summary?id=msk_impact_2017

When using this button:

image

Beyond record 500 everything is filled with NAs:

image
KenMain5 commented 4 months ago

The function to fetch the data is currently capped at 500. My plan is to set this to a higher, probably 12k but I need to examine our Spring backend first to see if our server can handle this large request or if it's needed to break it down. Would love to have the credentials to the database as well if anyone can send it.

Screenshot 2024-05-14 at 5 07 43 PM
KenMain5 commented 4 months ago

I've looked at the backend, I can and will create a push a commit tomorrow for the fix but would need the credentials so that I can test with the database