cBioPortal / cbioportal

cBioPortal for Cancer Genomics
https://cbioportal.org
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Clinical columns disappear after clicking reset column button #9869

Open leexgh opened 2 years ago

leexgh commented 2 years ago

Go to results view mutations tab, switch to another transcript, click "Columns" -> "Clinical", click any checkbox to add a new clinical column, then click "Reset columns", most clinical columns disappear, and only three left. This only happens when you switch to another transcript.

For example: https://www.cbioportal.org/results/mutations?cancer_study_list=ov_tcga_pub&cancer_study_id=ov_tcga_pub&genetic_profile_ids_PROFILE_MUTATION_EXTENDED=ov_tcga_pub_mutations&Z_SCORE_THRESHOLD=2.0&case_set_id=ov_tcga_pub_3way_complete&gene_list=BRCA1%20BRCA2&gene_set_choice=user-defined-list&mutations_transcript_id=ENST00000357654

First, switch to any other transcripts. Click transcript dropbox on the top right

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Taking second transcript as an example. Click second option from the transcript dropbox:

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By default, 1/23 columns available

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Adding a new column, now it has 2/23 columns available

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Click "Reset columns", only 1/3 columns available

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Karbelekedar commented 1 year ago

Hello!! I really wish to work and contribute here, kindly assign this issue to me.

Abhijeet-2003 commented 1 year ago

@onursumer @leexgh. It's working fine for me. After clicking "Reset Columns", it has 1/23 columns available

leexgh commented 1 year ago

@Karbelekedar Thanks for your interest! Please create a pull request and add us as reviewers

leexgh commented 1 year ago

@Abhijeet-2003 The problem only appears when you switch to another transcript. Please see new description above.

stale[bot] commented 1 year ago

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.

stale[bot] commented 1 year ago

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.

Akshat1000Sharma commented 1 week ago

Is this issue open? Can i solve it? I am new here and this will be my first open source ccommit.

leexgh commented 1 week ago

@Akshat1000Sharma Thanks for your interest! Yes this is still open, please create a pull request and pin us for review