cBioPortal / icebox

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genomic alterations performance #290

Open tmazor opened 3 years ago

tmazor commented 3 years ago

Not sure if this is the best way to share this - but while testing SV updates on beta, I found that the genomic alterations tab was taking forever to load - the page actually loaded with an error at first, which I suspect was due to a timeout, and then when I reloaded I pulled this from the network tab:

image

image

https://beta.cbioportal.org/results/comparison?cancer_study_list=msk_impact_2017%2Cluad_tcga_pan_can_atlas_2018&Z_SCORE_THRESHOLD=2.0&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cfusion%2Ccna%2Cgistic&case_set_id=all&gene_list=EGFR%2520ALK%2520ROS1&geneset_list=%20&tab_index=tab_visualize&Action=Submit&mutations_gene=ALK&comparison_subtab=alterations

I know we're all already aware that there are performance issues here, but I wanted to flag this as an example in case that's helpful in the ongoing performance improvements work.

inodb commented 3 years ago

this is def helpful, thank you! Please keep flagging cases like this :)

stale[bot] commented 3 years ago

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.

kalletlak commented 3 years ago

@jjgao @alisman @inodb This seems to be fixed by new cache implementation. But the initial load(when data is not cached) still takes ~40sec.

stale[bot] commented 2 years ago

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.

stale[bot] commented 2 years ago

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.