Open n1zea144 opened 10 months ago
A google group user reported that after querying the cBioPortal, a CNA is contained in the downloaded file that is not displayed on the web page. The study is acc_tga_pan_can_atlas_2018, the sample is TCGA-OR-A5J1-01, the gene is A1BG:
https://www.cbioportal.org/results/oncoprint?cancer_study_list=acc_tcga_pan_can_atlas_2018&Z_SCORE_THRESHOLD=2.0&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cstructural_variants%2Cgistic&case_set_id=acc_tcga_pan_can_atlas_2018_cnaseq&gene_list=A1BG&geneset_list=%20&tab_index=tab_visualize&Action=Submit
No alteration for sample in Oncoprint:
No alteration for sample i Download tab (last record in screenshot):
-1 CNA value in downloaded CNA file (first record in screenshot):
A google group user reported that after querying the cBioPortal, a CNA is contained in the downloaded file that is not displayed on the web page. The study is acc_tga_pan_can_atlas_2018, the sample is TCGA-OR-A5J1-01, the gene is A1BG:
https://www.cbioportal.org/results/oncoprint?cancer_study_list=acc_tcga_pan_can_atlas_2018&Z_SCORE_THRESHOLD=2.0&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cstructural_variants%2Cgistic&case_set_id=acc_tcga_pan_can_atlas_2018_cnaseq&gene_list=A1BG&geneset_list=%20&tab_index=tab_visualize&Action=Submit
No alteration for sample in Oncoprint:
No alteration for sample i Download tab (last record in screenshot):
-1 CNA value in downloaded CNA file (first record in screenshot):