Open nroak opened 3 years ago
When I download the tool and run it on my base conda environment, I'm getting the following error.
python oncotree_to_oncotree.py -i disease_code.oncotree.txt -o disease_code.oncotree.new.txt -s oncotree_2018_05_01 -t oncotree_2020_10_01 Traceback (most recent call last): File "oncotree_to_oncotree.py", line 587, in <module> main() File "oncotree_to_oncotree.py", line 576, in main source_oncotree_version_release_date, target_oncotree_version_release_date = validate_and_fetch_oncotree_version_release_dates(source_version, target_version, oncotree_api_url_base) File "oncotree_to_oncotree.py", line 72, in validate_and_fetch_oncotree_version_release_dates oncotree_versions_list = fetch_oncotree_versions(oncotree_api_url_base) File "oncotree_to_oncotree.py", line 52, in fetch_oncotree_versions response = urllib.urlopen(oncotree_version_endpoint_url) AttributeError: module 'urllib' has no attribute 'urlopen'
Here is my environment:
Python 3.7.3 (default, Mar 27 2019, 22:11:17) [GCC 7.3.0] :: Anaconda, Inc. on linux
Some online search points to updates to the code.
When I download the tool and run it on my base conda environment, I'm getting the following error.
Here is my environment:
Some online search points to updates to the code.