Fix and expand tests part II

[jbreue16]

This is a "meta"-issue to track the progress on the test maintenance

This PR continues #155 in fixing and expand our tests.

To do - Fix tests

• [ ] Fix Test scripts that should definitely work
  • [ ] multiple particle type Jacobian AD tests dont work in debug mode (assertion error in ParticleHelper.cpp extendModelToManyParticleTypes function )
  • [ ] debug tolerance for LRM LWE numerical reference parameter sensitivity 000 (0.0 != - 0.0)
  • [ ] why doesnt the LRM_DG sma with sensitivity test doesnt run on the server (https://github.com/cadet/CADET-Core/actions/runs/10406154811/job/28822534483)
  • [x] 1D models bwd flow tests (#155)
  • [x] inlet DOF Jacobian (#155)
  • [x] time derivative Jacobian FD (#155)
  • [ ] LRM + LRMP + GRM + GRM2D consistent init with SMA, should be fixed with #163
  • [ ] LRM + LRMP + GRM + GRM2D fwd vs bwd flow sensitivities
  • [ ] 2D GRM: 1) bwd == flow, 2) fwd/bwd Jacobian, 3) req. binding flux Jacobian vs FD, 4) fwd bwd flow sensitivity, 5) multiple particle types AD Jacobian
  • [ ] CSTR linear binding single particle matches particle distribution #249
  • [ ] DG tests:
  • [ ] consistent initialization with AD: linear req. and SMA req+kin for GRM and LRMP
  • [ ] consistent sensitivity initialization using AD jacobian with SMA binding for LRM
  • [ ] GRM_DG dynamic binding with surf diff par dep Jacobian vs AD
  • [ ] GRM_DG multiple particle type comparison tests
• [ ] Adjust tolerances
  • [ ] LRM + LRMP + GRM forward sensitivity tests FD
  • [x] all other FD tests (#155)
• [x] Actual errors: comment out and add new issue (if required)
  • [x] colloidal Jacobian #85

Fixes #70.

To do - Expand tests

• [ ] Add test where CSTR runs empty (but not negative) wrt liquid volume : Solid phase should stay constant
• [ ] Add CSTR consistent initialization test with vLiquid = 0
• [ ] test radial flow (#120 ) against analytical solution
• [x] enable h5 reader in testrunner (#172)
• [ ] numerical reference solution tests
  • [ ] read model setup directly from CADET-Database, not from CADET-Core
  • [x] reference data in h5 files, setup data in json (which can later be read from CADET-Database, CADET-reference) (#155)
  • [x] add meta data to reference data (source, name, info/description (hash will come in the future with CADET-database)) (#155)
  • [x] model setups (will be updated by CADET-Database in the future) (#155)
  • [ ] System with multiple unit operations, possibly a SMB
  • [x] Non-linear bindings for all chromatography units (numerical reference): LWE (#155)
  • [ ] Extensive single unit examples that test full functionality of the unit, ie Multiple particle types, shapes, binding per type
  • [x] experimental convergence order (EOC) tests (#155)
• [x] analytical Jacobian tests for all units using AD (#155)
• [x] create CADET-RDM project with python code that creates the reference data (#155)
• [ ] CI
  • [x] add CI flag (#155)
  • [x] add tests to github actions (#155)
  • [ ] include 2D GRM tests in CI
  • [ ] add release CI flag
  • [ ] move EOC tests to python scripts, which should also run before a release