Error installing from github

[fredoowarren]

Hi,

I have been trying to install the MetagenomStat package in rstudio and keep coming accross the following error:

devtools::install_github("cafferychen777/MicrobiomeStat") Downloading GitHub repo cafferychen777/MicrobiomeStat@HEAD ── R CMD build ─────────────────────────────────────────────────────────────── ✔ checking for file 'C:\Users\warrenf\AppData\Local\Temp\RtmpAZmkKW\remotes2ed41c6b2a8b\cafferychen777-MicrobiomeStat-4c387fb/DESCRIPTION' (513ms) ─ preparing 'MicrobiomeStat': (7s) ✔ checking DESCRIPTION meta-information ... ─ checking for LF line-endings in source and make files and shell scripts (1.3s) ─ checking for empty or unneeded directories ─ building 'MicrobiomeStat_1.1.3.tar.gz'

Installing package into ‘C:/Users/warrenf/AppData/Local/R/win-library/4.2’ (as ‘lib’ is unspecified)

• installing source package 'MicrobiomeStat' ... using staged installation R data moving datasets to lazyload DB inst byte-compile and prepare package for lazy loading Note: wrong number of arguments to 'sqrt' help installing help indices * copying figures building package indices ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for 'MicrobiomeStat' in namespaceExport(ns, exports): undefined exports: generate_taxa_latticeplot_single Error: loading failed Execution halted ERROR: loading failed
• removing 'C:/Users/warrenf/AppData/Local/R/win-library/4.2/MicrobiomeStat'

I am not sure what is causing this error, I have installed all fo the dependencies.

Thanks

Fred

[cafferychen777]

Hi Fred,

I apologize for the inconvenience. It seems that I accidentally pushed some unfinished code to GitHub, which is causing the installation issue. I am working on resolving this right away. Please give me a moment, and I will update the repository with the correct version. I appreciate your patience and understanding.

Best regards, Chen YANG

[fredoowarren]

Hi Chen,

Many thanks for your quick response, that’s working fine now. I look forward to trying out your package.

Many thanks

Fred

FRED WARREN Group Leader Quadram Institute Bioscience, Norwich Research Park, NR4 7UQ

T: +44 (0)1603 255000 D: +44 (0)1603 255092 @.**@.> www.quadram.ac.ukhttp://www.quadram.ac.uk

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Hi Fred,

I apologize for the inconvenience. It seems that I accidentally pushed some unfinished code to GitHub, which is causing the installation issue. I am working on resolving this right away. Please give me a moment, and I will update the repository with the correct version. I appreciate your patience and understanding.

Best regards, Chen YANG

— Reply to this email directly, view it on GitHubhttps://github.com/cafferychen777/MicrobiomeStat/issues/41#issuecomment-2014155269, or unsubscribehttps://github.com/notifications/unsubscribe-auth/BHGI7LPLSP6PVO7YIGVZFW3YZODBXAVCNFSM6AAAAABFCAH366VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDAMJUGE2TKMRWHE. You are receiving this because you authored the thread.Message ID: @.**@.>>