Question about the output tree from TreeWAS

caitiecollins / treeWAS

treeWAS: A Phylogenetic Tree-Based Tool for Genome-Wide Association Studies in Microbes

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Question about the output tree from TreeWAS #59

Closed npbhavya closed 2 years ago

npbhavya commented 2 years ago

I am running gene presence and absence table through TreeWAS with a tree constructed from the core genes. But the output from TreeWAS the branching is a little different, does TreeWAS reconstruct the tree based on gene presence and absence table?

npbhavya commented 2 years ago

Figured this out