issue with loading phenotypes

[rderelle]

Hi,

As I'm not particularly good with R, I'm struggling loading the phenotypes using the commands:

df <- read.table(file="phenotypes.txt",sep = ",") phen <- as.vector(unlist(df))

My file contains the phenotypes in the following format: sample1,A sample2,A sample3,B

I also tried the following format with no luck: sample1,sample2,sample3 A,A,B

Could you please let me know in which format the phenotypes should be provided? Any help would be highly appreciated.

Thanks

[rderelle]

found a solution.