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calico / basenji

Sequential regulatory activity predictions with deep convolutional neural networks.
Apache License 2.0
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tutorial broke #141

Closed mepster closed 1 year ago

mepster commented 2 years ago

The following line in the preprocessing tutorial

! basenji_data.py -d .1 -g data/unmap_macro.bed -l 131072 --local -o data/heart_l131k -p 8 -t .1 -v .1 -w 128 data/hg19.ml.fa data/heart_wigs.txt

is broken. I believe because a recent checkin of basenji_data.py changed the name of the sample_pct option from -d to -s

Thanks for making basenji available!

davek44 commented 1 year ago

I pushed a fix. Thanks!