search

calico / borzoi

RNA-seq prediction with deep convolutional neural networks.
Apache License 2.0
74 stars 8 forks source link

Weights of the mouse head #14

Open gokceneraslan opened 6 months ago

gokceneraslan commented 6 months ago

Paper is amazing Johannes & Dave et al., congrats! I was wondering if the weights of the mouse head are available too.

smitkadvani commented 5 months ago

weights for mouse heads are available at https://storage.googleapis.com/seqnn-share/borzoi/f0/model1_best.h5 https://storage.googleapis.com/seqnn-share/borzoi/f1/model1_best.h5

https://storage.googleapis.com/seqnn-share/borzoi/f2/model1_best.h5

https://storage.googleapis.com/seqnn-share/borzoi/f3/model1_best.h5 looking at baskerville repository, I realized that they have been following the convention 0 -> human (model0_best.h5) 1 -> mouse(model1_best.h5)

gokceneraslan commented 5 months ago

Oh this is amazing really, thanks so much!