calico / borzoi

RNA-seq prediction with deep convolutional neural networks.
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Tissue specificity of model predictions #16

Open fojackson8 opened 7 months ago

fojackson8 commented 7 months ago

Hi, great paper.

I'm just wondering about the tissue specificity of the gene expression predictions. Specifically, if we take model predictions for one tissue, eg monocyte - how do expression predictions for monocyte correlate with true gene exp. values for monocyte versus true gene exp. values for all other tissues? In other words, how specific are gene expression predictions for each particular tissue?

Apologies if I've missed this in one of the figures somewhere