calico / scBasset

Sequence-based Modeling of single-cell ATAC-seq using Convolutional Neural Networks.
Apache License 2.0
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Inquiry about scVI result #13

Closed fym0503 closed 1 year ago

fym0503 commented 2 years ago

Hi, Could you please provide the scRNA clustering results of the two datasets for neighborhood score computation? As I am working on a paper with scBasset as baseline, if using the same clustering of scRNA with you, the comparison will definitely be more reliable and fair. Thanks a lot