scipy error - Githubissues

calico / solo

software to detect doublets

MIT License

85 stars 13 forks source link

scipy error #43

Closed dylanmr closed 4 years ago

dylanmr commented 4 years ago

Hi,

I am attempting to implement the hash demultiplexing pipeline described in the vignette. I have generated h5ad files using the KITE pipeline from kallisto and am able to cleanly demultiplex using the seurat pipeline.

When I try to run solo I keep getting this error:

Do you have any suggestions?

Best, Dylan

njbernstein commented 4 years ago

Hi @dylanmr yes I do.

The master version on github has a fix for this, but I haven't made it pip installable yet. I'm guessing you installed from pip.

I'll put pushing a new release to pypi on my to-do list for today.

njbernstein commented 4 years ago

The fix has been released to pypi let me know if your issue is not fixed