search

callahantiff / OMOP2OBO

OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
http://tiffanycallahan.com/OMOP2OBO_Dashboard
MIT License
84 stars 12 forks source link

Coding: adding helper function to leverage OHDSIAnanke #35

Closed callahantiff closed 4 years ago

callahantiff commented 4 years ago

Needed Scripts: Simple extension added to helper functions to leverage functionality described in OHDSIAnanke. This should be a very simple and straightforward task since we almost do exactly what this method does, with some very minor extensions.

callahantiff commented 4 years ago

Done. Original OHDSIAnanke code has been expanded to allow a more generalizable approach, so it can be applied across all possible ontologies of interest.

New function added to data_utils.py as ohdsi_ananke().