Multi-Stage Docker Build -- Not Runnable Outside of Container

[callahantiff]

The multi-stage Docker container is runnable from within the container, but is not runnable from outside of the container. No error message is generated, but container hangs in main() and never seems to instantiate the first class in the workflow.

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Dockerfile Location: https://github.com/callahantiff/PheKnowLator/blob/adding_docker/Dockerfile

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Updates:

• [x] Docker runs successfully on my laptop
• [x] Dave helping me update Tantor to enable updating Docker to 1.17.05, the version needed to run multi-stage container

[callahantiff]

Thanks to @bill-baumgartner - Docker is now fully functional!

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Just for archiving purposes, the following commands are used when interacting with the container:

BUILD CONTAINER

docker build -t pkt:2.0.0 .

RUN pkt FROM OUTSIDE CONTAINER (example)

docker run --name pkt_test --rm -ti -v /Users/tiffanycallahan/Dropbox/GraduateSchool/PhD/LabWork/PheKnowLator/resources/knowledge_graphs/:/PheKnowLator/resources/knowledge_graphs/ pkt:2.0.0 --app subclass --kg full --nde yes --rel yes --owl no --kgm yes

RUN pkt FROM INSIDE CONTAINER (example)

docker exec -ti pkt_test sh -c "/PheKnowLator/entrypoint.sh --app subclass --kg full --nde yes --rel yes --owl no --kgm yes"