callahantiff / PheKnowLator

PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
https://github.com/callahantiff/PheKnowLator/wiki
Apache License 2.0
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Create Notebook to Enable pkt use in Efforts like HuBMAP #80

Closed callahantiff closed 3 years ago

callahantiff commented 3 years ago

TASK

Some of the Human BioMolecular Atlas Program (HuBMAP) sites are interested in being able to utilize specific edge sets from the OWL-NETS builds of pkt. This will be significantly easier for us to assist with and support longterm after the new CI/CD framework is up and running. To make it easy for site to use we need to build a notebook that demonstrates how to do this (using the Pittsburg work as an example).

TODO

callahantiff commented 3 years ago

Done - see notebook here: https://github.com/callahantiff/PheKnowLator/blob/master/OWLNETS_Example_Application.ipynb