Clinical Source Code Verification: Student 1

[callahantiff]

Student (GitHub Username): @emswen Verification Number: 1

Assigned Domain Expert: @jwyrwa

Verification Task Description: DropBox Paper Documentation

Phenotype Descriptions: project wiki

Verification Assignments:

• Appendicitis
  • [x] Conditions (n=129) -- #57
  • [x] Observations (n=10) -- #60
• Crohn’s Disease
  • [x] Conditions (n=6,448) -- #61
• Hypothyroidism
  • [x] Conditions (n=26,855) -- #62
  • [x] Observations (n=51) -- #63
  • [x] Measurements (n=1,039) -- #64
  • [x] Procedures (n=4) -- #65
• Peanut Allergy
  • [x] Conditions (n=10) -- #66
  • [x] Observations (n=34) -- #67
  • [x] Measurements (n=65) -- #68
  • [x] Procedures (n=6) -- #69
• Steroid-Induced Osteonecrosis
  • [x] Conditions (n=2,288) -- #70
  • [x] Observations (n=3) -- #71
  • [x] Measurements (n=406) -- #72
• Systemic Lupus Erythematosus
  • [x] Measurements (n=781) -- #73

[callahantiff]

@emswen -- Just an update. @kandrews11 brought up something important that I wanted to share with you:

Specifically, can you please add as a comment a brief explanation and/or resource link whenever the category chosen is NOT “Exactly Matches Definition String + Clinically Relevant”?

[callahantiff]

@emswen - Just a reminder, once you have finished verifying each file, can you please do the following:

• [ ] Check the box that corresponds to the file above?
• [ ] Close the specific issue (hyperlinked above) and include a brief comment to confirm its completion? This is also a great time to add any additional information that you think is important for me to know or keep in mind as I move onto the next phase of the analysis.
• [ ] Add the date of completion to the Dropbox Paper table (here).

Thanks and great work so far! 💪

[callahantiff]

• [x] Closing this issue. According to the DropBox paper documentation, all verification tasks are complete. AWESOME JOB!! 🎉

Please feel free to re-open if more work is needed on this task.