When the GitHub repository name differ from the package name, then install incorrectly summaries the results saying the package failed to install, e.g.
> source("http://callr.org/install#satijalab/seurat")
[...]
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (Seurat)
Package updates:
Previous Current
cowplot <NA> 0.7.0
FNN <NA> 1.1
RcppProgress <NA> 0.3
ROCR <NA> 1.0-7
seurat <NA> <NA>
Seurat <NA> 1.4.0
tclust <NA> 1.2-3
tsne <NA> 0.1-3
Failed to install requested package: 'seurat'
but the package did install as the table shows and:
library("Seurat")
Loading required package: ggplot2
Loading required package: cowplot
Attaching package: 'cowplot'
The following object is masked from 'package:ggplot2':
ggsave
When the GitHub repository name differ from the package name, then
install
incorrectly summaries the results saying the package failed to install, e.g.but the package did install as the table shows and: