Running workflows (Nextflow or Snakemake)

cambiotraining / hpc-intro

Practical course on running jobs on a HPC

https://cambiotraining.github.io/hpc-intro/

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Open tavareshugo opened 2 years ago

tavareshugo commented 2 years ago

Add an extra section about how to run workflows on HPC:

Can run from login node - the workflow software will submit jobs for us automatically
Need to run it from a persistent session using tmux or screen so it can be detached while the workflow runs.
- need to teach how to login to the specific login node where tmux was left running.

tavareshugo commented 1 year ago

Could be part of a separate "advanced" module together with #15