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camlab-bioml
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cytomarker
Interactive design and validation of antibody panels using single-cell atlases
https://camlab.shinyapps.io/cytomarker/
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PR_MW_23Mar2023
#122
Closed
matt-sd-watson
closed
11 months ago
matt-sd-watson
commented
1 year ago
Summary of proposed changes:
Modify marker finding from
findMarkers
to
scoreMarkers
in order to speed up analysis and remove p-value computation/display. Resolves #49
Resolve #118 with the modification used as above
Fix when UMAP precomputed lists are toggled
Update Dockerfile with latest packages and dependencies
Add python script used to simulate user traffic on shinyapps server using selenium web scraping
Update README with latest changes
Summary of proposed changes:
findMarkerstoscoreMarkersin order to speed up analysis and remove p-value computation/display. Resolves #49