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campbio / scruff

Single Cell RNA-seq UMI Filtering Facilitator
http://bioconductor.org/packages/scruff/
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Check the validity of input cell barcode (validCb) #131

Closed zhewa closed 4 years ago

lintr-bot commented 4 years ago

R/scruffFunctions.R:284:1: style: Lines should not be more than 80 characters.

​.tenxCheckCellBarcodes <- function(bam, validCb, yieldSize = 10000, tags = "CB") {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
codecov-io commented 4 years ago

Codecov Report

Merging #131 into master will not change coverage. The diff coverage is 0%.

Impacted file tree graph

@@          Coverage Diff          @@
##           master   #131   +/-   ##
=====================================
  Coverage       0%     0%           
=====================================
  Files           9      9           
  Lines        1810   1740   -70     
=====================================
+ Misses       1810   1740   -70
Impacted Files Coverage Δ
R/alignRsubread.R 0% <ø> (ø) :arrow_up:
R/scruffFunctions.R 0% <0%> (ø) :arrow_up:
R/tenxBamqc.R 0% <0%> (ø) :arrow_up:
R/gview.R 0% <0%> (ø) :arrow_up:
R/demultiplex.R 0% <0%> (ø) :arrow_up:
R/countUMI.R 0% <0%> (ø) :arrow_up:
R/scruff.R 0% <0%> (ø) :arrow_up:
R/qcplots.R 0% <0%> (ø) :arrow_up:
... and 1 more

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