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camwebb / phylomatic-ws

Improved web service for phylomatic
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tips for pmws(gawk) #6

Open zhenpingli opened 3 years ago

zhenpingli commented 3 years ago

1:change the 200000 for a big dateset 2:change the first line of pmws to your gawk location , by whereis gawk to find it and sudo apt install gawk to install it 3:change cat eg/input1 | /usr/bin/time pmws to cat eg/input1 | /usr/bin/time ./pmws 4:some time should chmod +x pmws to give the right to run for pmws

camwebb commented 3 years ago

Thanks! Major overhaul coming to phylomatic (it's going offline and into an R package). But the awk version will continue and I'll document it better. Thanks for your tips.