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cancerDHC / ccdhmodel

CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)
https://cancerdhc.github.io/ccdhmodel/
BSD 3-Clause "New" or "Revised" License
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Reflect any mappings currently in Python code in terminology server or model #161

Open turbomam opened 2 years ago

turbomam commented 2 years ago

For example, there are mapping statements using skos predicates for several terms, but not cancer stage observation types.

See also cancerDHC/example-data#31

gaurav commented 2 years ago

I feel like this issue should be moved to the ccdhmodel repo: those mappings (or their documentation, or a link to their documentation) ought to be in the model. Is there a reason we should tackle this in the Example Data repo?

turbomam commented 2 years ago

I agree about moving to ccdhmodel.

gaurav commented 2 years ago

Could you please start making a list of these terms in this issue? Even once we end up with exemplar CRDCH datasets in the Example Data repo, I suspect that it won't be easy to find them all when we need them. It would also be useful to see if they are grouped in any particular way.