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cancerit / BRASS

Breakpoints via assembly - Identifies breaks and attempts to assemble rearrangements in whole genome sequencing data.
GNU Affero General Public License v3.0
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Issue with creating tmp directory #102

Open anoronh4 opened 3 years ago

anoronh4 commented 3 years ago

got a similar error as in ascatNgs. I captured the error this time:

STDERR: Error in tempfile() using template /scratch/myusername/XXXXXXXXXX: Could not create temp file /scratch/myusername/wjItxIIcp5: Read-only file system at /opt/wtsi-cgp/lib/perl5/Capture/Tiny.pm line 360.

it was similarly solved by changing the $TMPDIR env variable.