BRASS shows very poor recall performance in inversions (it works flawlessly with the rest of SV types) in BAM files made of slices of genomes (with no reads between slices). What could be reason behind this? Maybe BRASS checks for some positions of the genome that might be empty in the BAM file?
BRASS shows very poor recall performance in inversions (it works flawlessly with the rest of SV types) in BAM files made of slices of genomes (with no reads between slices). What could be reason behind this? Maybe BRASS checks for some positions of the genome that might be empty in the BAM file?