Feature/log exp speedup

cancerit / CaVEMan

SNV expectation maximisation based mutation calling algorithm aimed at detecting somatic mutations in paired (tumour/normal) cancer samples. Supports both bam and cram format via htslib

http://cancerit.github.io/CaVEMan

GNU Affero General Public License v3.0

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Feature/log exp speedup #97

Closed ghost closed 4 years ago

ghost commented 4 years ago

@keiranmraine Are you able to cast an eye over this please? CI here

keiranmraine commented 4 years ago

CI shows a small increase in memory foot print, not clear how this will shake out in individual jobs arrays but we'll need to keep an eye when we move to pipeline