cancerit / alleleCount

Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings)
http://cancerit.github.io/alleleCount/
GNU Affero General Public License v3.0
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Is htslib 1.10.2 supported? #63

Closed roryk closed 3 years ago

roryk commented 4 years ago

The bioconda recipe has this pinned to htslib 1.9-- do you know if 1.10.2 works? I'm updating a bunch of recipes that are linked to old versions of htslib, and this is one of them.

keiranmraine commented 3 years ago

1.11 is in our version and image