Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings)
The bioconda recipe has this pinned to htslib 1.9-- do you know if 1.10.2 works? I'm updating a bunch of recipes that are linked to old versions of htslib, and this is one of them.
The bioconda recipe has this pinned to htslib 1.9-- do you know if 1.10.2 works? I'm updating a bunch of recipes that are linked to old versions of htslib, and this is one of them.